Gene detail

Gene detail information of Glyur000196s00010883

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G67520.1	1.00E-47	lectin protein kinase family protein
NR	KEH19150.1	0	cysteine-rich RLK (receptor-like kinase) protein [Medicago truncatula]
Swissprot	tr\|O64793\|Y1675_ARATH	5.00E-50	G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 (Precursor)
trEMBL	tr\|A0A072U017\|A0A072U017_MEDTR	0	Serine/threonine-protein kinase {ECO:0000256\|PIRNR:PIRNR000641}

Sequence

Transcript Sequence

>Glyur000196s00010883.1
ATGGNACTTTGCAGTGAACAAGGGAAACCTCAATTAGTTTTTCTTGTCTTCACATACTTGTACATGATGTGGTGGACTACTTCTATCATCCAATATGTCAAAGCAGAAAATTATGACAGTTTGAAGCCAGGTGATACACTGAATGCAACAGACTATCACGAGCTATGTTCTAAACAAGGTACCTATTGCATGAGGTTTGGCCAATTATCTTCTTATCAAGACTCCACTTACCTACAAATATATGCTAGAGGAAAAGAAGATGATTGGTTAGTGTGGACTGCTAACAGGAACCAACCTGTTGATGCAGATTCTGCAGTTTTAGTACTAGACCACTTTGGTGTACTGAAAATAGAATCCAACACTACTAGGAAACCAATAATCCTTTACTCTTCACCTCAACCAGTACTTCACAACAATAGTACTATTGTGGCCACCTTGTTGGATACAGGCAACTTTGTAGTGCAACAACTTCACCCCAANGGGATGAACACTGTTTTGTGGCAAAGTTTTGATTATCCCACTGACACTTTGATCCCTGGGATGAAGCTAGGTGTGAATCACAAAACTGGTCATAACTGGTCGCTGGTCACATGGTTATCTCATTCAATCCCGGCTCCCGGTCCGTTCAGGCTCGAGTGGGAACCCAGAAGAGGAGAATTGGTCATCAAGCACAGAGAACAAGTTTACTGGAAAAGTGGAGAACTGAGAAACAAAAGATTTGAGCACATCTCTTCTGCAGAATTCCAGTATGAAATTATGTCCAATAAGGATGAAGAAGAGCACATCAAATTCACAACTATAAATGAAGAACTTATCAAATGGACTCTATTAGAAACCGGTCAGCTGATAAGCAAGAGGAAAGGAAATGATATAGCAAGGGCTGATTTGTGTTATGGCAAGGATGGTTACCCCAGTTATAAAATGGCAGATGATCTAACAAATGCTAGTTATAGCATAAGTGATTGTCGGGCTATTTGTTGGAGCAACTGCAGCTGCATTGGATTCAAATCCTATGACGATGATGACGGCATTGGTTGTACGTTATTTCTATCAATGGAAGGTACTAATATTGCAGATGGTGGCCAAAAAATTTACATGCTAGGAAAGAACACACATCACAAAGATAAACACAAGTGGATATGGATAAGCGTTGCAATAACATCTTCACTACTCATAACCTGCCTTTCCATTCAGTGTGGAGCCTTAATGAAACGAAAATATGTGCTTAGAGTGAATAAAAGAAAGAGAATGGGGAGTGAGATACAAGAACTTGAAGCTTCTGGGGGATACTCTAGTGGCAATGATCTAGAATTTGATTTAAGCAAGGGAGATGACTTAAAAGTATTTAGCTATGCATCAATTAGNGTGGCTACCAATGATTTTTCTTCTGAAAACAAGTTAGGACAGGGAGGCTTTGGACCTCTCCAGCATACCAATCTCGTTCAGCTACTTGGTCACTGCATTCATGAACAAGAGAGGATGTTGATCTATGAGTATATGCCGAATAAAAGCTTGGACTTCTTTTTATTTGGTGTGGCTCTTCAGTTGGTGGATTCAGCACTAAATGATTCGTTCTCTGAGGATGAGGTGTTAAGATGTGTTCATGCTGGTCTACTATGCGTAGAAGAAAATGCAGATGATCGCCCCACCATGTCCAACGTTATATTAATGTTAGCAAACAAAAGTAAAGTGAACACTTTGCCTAAAAAACCAGCATACTATGGTAGATCAACAAGTGTCTTTGAGGAAGAAACTGAACAAGGGAAACCTCAACTAGTTTTTCTTGTCTTCACATACTTGTACATGATGTGGTGGACTACTTCTCTCATCCAATATGTCAAAGCAGAAAATTATGACAGTTTGAAGCTAGGAGAAACACTGAATGCAACAGACAAGCTATGTTCTAAACAAGGTACCTATTGCGTGAGTTTCAACGACAAATTATCTTCTCATAAAAACCTCACTTACCTACAAATAAATCCCAGAGGAAAAGATGATTGGCAAGTGTGGGTTGCTAATAGGAACCAACCTGTTGATGCAGATTCTGCAGTTTTAGTACTAGACCACTCTGGCGTACTAAAAATAGAATCCAACACTACTAAGGAACCAATAATCCTTTACTCTTCACCTCAACCAGTTGACAATAGTACCACCATGGCCACCTTGTTGGATACAGGCAACTTTGTGGTGCAACAAATTCACCCCAATGGGACGAACACTGTGTTGTGGCAGAATTTTGATTATCCCACTGACACTTTGGTCCCTGGGAAGAAGCTAGGTGTGAATCACAAAACTGGTCATAACTGGTCACTGGTTTCATGGTTAGGTAATACAAACCCGGCTTCCGGTCCATTCAGGCTTGAGTGGGAACCAAGGACCAGAGAATTGGTCATCAACCATAGAGAACAAGTGTACTGGAGAAGTGGAGAATTGAGAAACAATAGATTTAAGCACATCTCTTCCTCTGCAGAATTCCAGTATGAAACTGTGTCCAACAAGGATGAAGAGTACTTCATATTGAACACTGCAAATGAAGACAAATTTCTAATGTGGGCTCTATTAGAAACTGGTCAACTGATAAGCAGAAGCAGGGGGGATGATATAGCAAGGGCTGATTTGTGTTATGGGTACAACACTGATATTGAAGGGTGCCAAAAGTGGGAGGAGATACCAACCTGCAGGAGTCATGGCGATGTTTTTGAGATGAAGACAGGTTACCCCAATTATGACGTGGCAAACAATCTAATGAATGCTAGTTATAGCATAAGTGATTGTCAGGCTATTTGTTGGAGCAACTGCAGCTGCGTTGGATTCAAATCCTATGATGATGATGATGGAACTAGTTGTACGTTTTTTGCATCAACACAAGGTACTAATATTGCAAACAGTGGGCAACCCTTCTACATGCTAGTAAAGAGCACCCATCACAAAGAGAATAAANTTAAGAGAATGNAGAAGGAGATGCTGGATTTGACAACTTCTAATGAATCCTCTGTTATCAAAGATCTTGAAGATGATTTAAAAGGACATGATATAAAATTGGTGGATTATTCAGCACTAAATGATTCGTTTTGTGAGGAGGAGGTGGTAAGATGCGTTCATGCTGGTCTACTATGCATAGAAGAAACTGCAGATGATCGCCCCACCATGTCCAACGTTATATTAATGTTAGCAAACAAAAGTAAAGTGAACACTTTGCCTAAAAAACCAGCATACTATGGTAGATCAACAAGTGTCTTTGAGGAAGAAACGTATACTAATGAATCTGTGAACAAGGGAAACCTCAATTAG

Protein Sequence

>Glyur000196s00010883.1
MXLCSEQGKPQLVFLVFTYLYMMWWTTSIIQYVKAENYDSLKPGDTLNATDYHELCSKQGTYCMRFGQLSSYQDSTYLQIYARGKEDDWLVWTANRNQPVDADSAVLVLDHFGVLKIESNTTRKPIILYSSPQPVLHNNSTIVATLLDTGNFVVQQLHPXGMNTVLWQSFDYPTDTLIPGMKLGVNHKTGHNWSLVTWLSHSIPAPGPFRLEWEPRRGELVIKHREQVYWKSGELRNKRFEHISSAEFQYEIMSNKDEEEHIKFTTINEELIKWTLLETGQLISKRKGNDIARADLCYGKDGYPSYKMADDLTNASYSISDCRAICWSNCSCIGFKSYDDDDGIGCTLFLSMEGTNIADGGQKIYMLGKNTHHKDKHKWIWISVAITSSLLITCLSIQCGALMKRKYVLRVNKRKRMGSEIQELEASGGYSSGNDLEFDLSKGDDLKVFSYASIXVATNDFSSENKLGQGGFGPLQHTNLVQLLGHCIHEQERMLIYEYMPNKSLDFFLFGVALQLVDSALNDSFSEDEVLRCVHAGLLCVEENADDRPTMSNVILMLANKSKVNTLPKKPAYYGRSTSVFEEETEQGKPQLVFLVFTYLYMMWWTTSLIQYVKAENYDSLKLGETLNATDKLCSKQGTYCVSFNDKLSSHKNLTYLQINPRGKDDWQVWVANRNQPVDADSAVLVLDHSGVLKIESNTTKEPIILYSSPQPVDNSTTMATLLDTGNFVVQQIHPNGTNTVLWQNFDYPTDTLVPGKKLGVNHKTGHNWSLVSWLGNTNPASGPFRLEWEPRTRELVINHREQVYWRSGELRNNRFKHISSSAEFQYETVSNKDEEYFILNTANEDKFLMWALLETGQLISRSRGDDIARADLCYGYNTDIEGCQKWEEIPTCRSHGDVFEMKTGYPNYDVANNLMNASYSISDCQAICWSNCSCVGFKSYDDDDGTSCTFFASTQGTNIANSGQPFYMLVKSTHHKENKXKRMXKEMLDLTTSNESSVIKDLEDDLKGHDIKLVDYSALNDSFCEEEVVRCVHAGLLCIEETADDRPTMSNVILMLANKSKVNTLPKKPAYYGRSTSVFEEETYTNESVNKGNLN

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00196	236914	259653	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000196s00010883.1	PF01453.19	B_lectin	90	202	2.20E-22
Glyur000196s00010883.1	PF08276.6	PAN_2	313	348	2.70E-05
Glyur000196s00010883.1	PF01453.19	B_lectin	669	780	1.00E-22
Glyur000196s00010883.1	PF08276.6	PAN_2	911	951	0.00017

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.070
SRR1783600	control	0.043
SRR1783602	moderate drought stress	0.806
SRR1811619	moderate drought stress	0.794

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.267
DRR006520	Root Summer glycyrrhizin high producing strain	0.386
DRR006521	Root Winter glycyrrhizin high producing strain	0.128
DRR006522	Root Winter glycyrrhizin high producing strain	0.087
DRR006523	Root Summer glycyrrhizin low producing strain	4.027
DRR006524	Root Summer glycyrrhizin low producing strain	3.550
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.017
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.068

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	8.517
SRR2868004	Drought Stress (root)	7.903
SRR2967015	Control (root)	8.356

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.051
SRR9715740	Leaf	0.054
SRR9715741	Leaf	0.092
SRR9715739	Root	0.071
SRR9715742	Root	0.200
SRR9715743	Root	0.180

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.013
SRR8749028	MeJA induced 9h	0.002
SRR8749029	MeJA induced 9h	0.016
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.005
SRR8749032	Uninduced	0.006

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.714
SRR8400027	Control - Root	0.398