Gene detail

Gene detail information of Glyur000196s00010881.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G16270.2	3.00E-176	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain
NR	XP_004516240.1	0	PREDICTED: uncharacterized protein LOC101506621 [Cicer arietinum]
COG	YP_001958461.1	1.00E-27	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	3.00E-51	Serine/threonine-protein kinase EDR1
trEMBL	tr\|I1MI76\|I1MI76_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA15G28430.3}

Sequence

Transcript Sequence

>Glyur000196s00010881.1
GTTCACACTTCACAGGGCAATTGCTATACAGTTAGGTTGCAAGTTGGGAAATAAAAAATCAGTAGTCTTTCTTGAGAGTTTCAAAGATCAGATTCTTCACATTTCTGTGTGGTTCCACGGCATCACTAAAATCTAGAACTCCTTTTTACTCAGAAAAAATATGGCATGATGGAACAGTCAAGATTCCACAAACAGCTTCAATGCAATACCATGGAACCTAGAAATGAGGAATTCCAGCCCGGGTATCAGTCAGTAATGCAGAACCATCTGGATGTCATGCATGCTAATAGAAGACCATCTGATCATAACACATCAGATGTTAAACCAGTACTTAATTATTCAATACAGACAGGATCTGTGAGTGGGTCAGACATTTCTATGCTCTCAACTGTTGAGAAAGATCCAACAGAGTTTAACAGACAGAGTACATGGTTACATGGAGACAGAAGCAATNATGGGTCAATTCGATCAACACCAAGAATTTCAATGAATCAGGAGACTGGTCAATATGTGCGTGGGTATGGTTCTTCTGGTGGTTCTGATAGCTCATCAATGATGATGAAGTGTCTTTGTAGCTTTGGTGGTAGGATATTACCACGGCCAAGTGATGGAAAATTAAGGTATGTGGGAGGTCAAACACGTATTCTTCGTCTAAGGAAGGACATATCTTGGCAGGACCTTAAGCAGAAAGCATTGNTAATCTATAATCTGGTTCATGTACTGAAGTATCAACTTCCCGGGGAAGACCTTGATGCTTTGGTATCTGTATCATCTGATGAGGATTTGCAGAATATGATGGAGGAATATAATCTTGTAGAAGATAGAGAACGCCCACAAAAGCTTAGGATGTTTTTGTTCTCAATGAGTGATTTAGAAGATGCTCAGTTTGCTCTCAGTAGCATTGGTGATGATTCTGAGATCCAGTATGTTGTTGCTGTTAATGGCATGGACTTGGGATCAAGAAACAACTCAACCCCACTTGGTGTCAGCTTTTCAGCAGATGATCTACATGAATTGGACAGGCAAACCATGGAAAGGGAGACTAGCAGAGTTGCTGTGGAATGTATAGGTGTCAGCAATGCTTCCTTGACTAACAAATCCGACACTTCATTGGCTATTCAGTCTTCACAGCCAGTATTACCGACTTCTTCAAATGCTTATGAAACTGATCAACTGACTTATGGTGACCAAATGATGCAAGCTGGGGAAGTTAGTCGTCAATATTTTGTTCAGGGCCTTAATCCCTCTCATAACCCTGTGATTGGAGAGACTACTATTTCTATGGCTCCTCATCTGCCGAGCAATCAACAAGGGACTCTTAATGAAGACCATCCACCCAGTGGATTACAAATGCAAAAATCTGAACTACCAACAATGCCGGTGAAAAATATAGGTGATAGTTCAATTAAACAAGGGAGTGAACCTGGTAAAGGTCTATCCTTGGAAACCCCATCCCCAGCTCCCTCACAACCCTTTGATGGTTACTTGAAAAATAATTGTCCCGAAGCATCAGTTGTAGTTACCATGCCTGAGGGGCATCTACCTTCATTGCCTTCCACAAAAAAGGTTCATCATCAGGATTATGAAGAGGCCTCTTCTACATCAAGCAGTGCATTTGTTCCTGCTTATGTTGATTCCCACTCNAATGCAATTGATTTGAATTCTCTTCATCCTCCTCCACTTCCTAAAAGAGTTTATTATTCAGAAAGAACTCCCAGGGATCAAGTAGAGGTCCTGAACCGGTCCTCAAAGTCAGATGACACACACAGCTCTCAGTTTCATGTGTCAGATTTACTTTCTGATGTCAAGCCAGAGGATCCAGTAACAGAATCTGGTGACAACTTGTATAATGGTAACCTGTCAAATCTAACTGAGAAGCTGAGTATTGCAGCAAAGCCCTTGCCTGCAGATGACCATACCATTGGCAATGGGTTTGCCAAACATCAAATGAATAAACCGTTGCCTGATACAAACAGTCAGATTAAGTCAAACCTACCTGAGCGTATGGATCCTGAGTTCAAGCAGGTGTTACTGAGCAACGAAGGAAGTAAAGATGTGGAAACTGAAAATTATTGCAAAGATAACCATATCAAGCCCTTGCTTGATGAAACCAAAACCAAAGATGGTAAAGCAAATCTTCCNGCTATTCATCACATTTCCTCTGTTAATCATCTTGATGATCCAGCATCCAANCTTCCAGAGATTGATTGGGGTGAGGCCTTTGGGGAGGATTCTAATGATAATCATATTGTGCAAGCACTACCTGTTTCTTTGACTGGGAACATAACCAAAGATGTTTCTCAAGATTTTCCTCCAAATGTTTCCAAACAAGTACAAGGTGACATTCAAATTGATATCGATGATCGATTTCCTCGTGAGTTGCTTTCTGATTTATTTTATAAAGCAATAGTTGCAGAAGATCCATCCAGGCTACATCCACTACCCACAGATGGAATGGGTTTAAGCATAAATATGGAAAATCATGAACCTACAAGATGGTCATATTTTCGAGAGCTGGCACAACAAGGGCTTGATAATGTCTCTCTTATTGATCAAGATCATCTTGGGTTTTCACCTGTGATGGGAAAAACAGCNGATAATGGAGGTCATCATGTTACACCTCTAACAAGTGATGGAGTTCCTCCAGATCATGAGGATTCCCACCTCAATTTTGATGAAGAAAATCAGGACTTACATAGAAGGATTGAAACAGAAGCCACTGTTCTCAAGTCCAATTATGATCAATCCCAACTTACGGACACTGAAAGTATNCAGTTTGATGCTATGATGGAAAACCTAAGAGCACACGAGTCAGAGTATGAGGATGGAAAGTTTGAAACAAAAAATTGTAATCTACCTCCACTTGATCCTTCTTTAGGAGATTTTGATATCAATTCTGTGCAGGTCATTAAGAATGAAGATCTTGAAGAGCTGAGGGAACTAGGTTCTGGTACATTTGGGACTGTGTATCATGGAAAATGGAGAGGAACGGATGTTGCTATTAAAAGAATAAAGAAGAGTTGCTTCACTGGTCGATCATCTGAGCAAGAGAGACTGACTGTGGAGTTCTGGCGGGAAGCTGACATTCTTTCCAAGCTTCATCATCCAAATGTGGTTGCATTTTACGGTGTGGTACAGGATGGACCAGGAGGAACGATGGCTACTGTTACAGAATTCATGGTGGATGGTTCTCTTAGGCACGTTTTACTTCGCAAGGATAGGTATCTGGATCGTCGCAAGAGGCTGATAATTGCAATGGATGCAGCTTTTGGAATGGAATATTTACACTCAAAAAACATTGTGCATTTTGACTTAAAATGTGACAATTTGCTTGTGAACTTGAAAGATCCTTTACGGCCAATATGCAAGGTTGGTGATTTTGGCTTGTCAAAAATTAAACGAAATACCTTGGTTACTGGTGGCGTGCGGGGGACTCTACCTTGGATGGCACCGGAGCTGCTGAATGGAAGCAGCAACAAGGTCTCAGAAAAGGTTGACGTGTTCTCCTTTGGCATAGTATTATGGGAAATATTAACCGGTGAGGAGCCATATGCCAATATGCACTATGGTGCAATTATAGGTGGGATTGTGAATAACACATTGAGGCCAACCATTCCNAAAGAGTGTGATGCTGAATGGAGAACACTGATGGAGCAATGTTGGGCACCCAACCCTGGAGCCAGGCCTTCCTTCACTGAAATTGCAAGTCGCTTGCGCATTATGTCCGCAGCAGCTACCCAAACAAAAACACAGGGAGGCACCAAGGCATCCAAATGACTTATTTAGAGATAGTAGTAATTGGCATTTATACTGTCAAATTCAATTCATTTAATGGTACCTCCTCTAGGAAGTAAATTATGCTGCC

Protein Sequence

>Glyur000196s00010881.1
MMEQSRFHKQLQCNTMEPRNEEFQPGYQSVMQNHLDVMHANRRPSDHNTSDVKPVLNYSIQTGSVSGSDISMLSTVEKDPTEFNRQSTWLHGDRSNXGSIRSTPRISMNQETGQYVRGYGSSGGSDSSSMMMKCLCSFGGRILPRPSDGKLRYVGGQTRILRLRKDISWQDLKQKALXIYNLVHVLKYQLPGEDLDALVSVSSDEDLQNMMEEYNLVEDRERPQKLRMFLFSMSDLEDAQFALSSIGDDSEIQYVVAVNGMDLGSRNNSTPLGVSFSADDLHELDRQTMERETSRVAVECIGVSNASLTNKSDTSLAIQSSQPVLPTSSNAYETDQLTYGDQMMQAGEVSRQYFVQGLNPSHNPVIGETTISMAPHLPSNQQGTLNEDHPPSGLQMQKSELPTMPVKNIGDSSIKQGSEPGKGLSLETPSPAPSQPFDGYLKNNCPEASVVVTMPEGHLPSLPSTKKVHHQDYEEASSTSSSAFVPAYVDSHSNAIDLNSLHPPPLPKRVYYSERTPRDQVEVLNRSSKSDDTHSSQFHVSDLLSDVKPEDPVTESGDNLYNGNLSNLTEKLSIAAKPLPADDHTIGNGFAKHQMNKPLPDTNSQIKSNLPERMDPEFKQVLLSNEGSKDVETENYCKDNHIKPLLDETKTKDGKANLPAIHHISSVNHLDDPASXLPEIDWGEAFGEDSNDNHIVQALPVSLTGNITKDVSQDFPPNVSKQVQGDIQIDIDDRFPRELLSDLFYKAIVAEDPSRLHPLPTDGMGLSINMENHEPTRWSYFRELAQQGLDNVSLIDQDHLGFSPVMGKTADNGGHHVTPLTSDGVPPDHEDSHLNFDEENQDLHRRIETEATVLKSNYDQSQLTDTESXQFDAMMENLRAHESEYEDGKFETKNCNLPPLDPSLGDFDINSVQVIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFTGRSSEQERLTVEFWREADILSKLHHPNVVAFYGVVQDGPGGTMATVTEFMVDGSLRHVLLRKDRYLDRRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPLRPICKVGDFGLSKIKRNTLVTGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPTIPKECDAEWRTLMEQCWAPNPGARPSFTEIASRLRIMSAAATQTKTQGGTKASK

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00196	222364	228765	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:2.1.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000196s00010881.1	PF00564.19	PB1	147	231	1.20E-18
Glyur000196s00010881.1	PF07714.12	Pkinase_Tyr	921	1183	1.80E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.272
SRR1783600	control	13.594
SRR1783602	moderate drought stress	14.741
SRR1811619	moderate drought stress	14.509

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.537
DRR006520	Root Summer glycyrrhizin high producing strain	12.752
DRR006521	Root Winter glycyrrhizin high producing strain	9.343
DRR006522	Root Winter glycyrrhizin high producing strain	9.126
DRR006523	Root Summer glycyrrhizin low producing strain	16.186
DRR006524	Root Summer glycyrrhizin low producing strain	15.825
DRR006525	Leaf Summer glycyrrhizin high producing strain	9.076
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.842

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	20.081
SRR2868004	Drought Stress (root)	20.710
SRR2967015	Control (root)	18.313

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	17.384
SRR9715740	Leaf	18.694
SRR9715741	Leaf	19.292
SRR9715739	Root	1.507
SRR9715742	Root	13.310
SRR9715743	Root	13.665

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	21.866
SRR8749028	MeJA induced 9h	25.536
SRR8749029	MeJA induced 9h	14.203
SRR8749030	Uninduced	12.204
SRR8749031	Uninduced	10.493
SRR8749032	Uninduced	8.788

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	19.292
SRR8400027	Control - Root	18.786