Gene detail information of Glyur000196s00010869 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G79510.2 | 4.00E-67 | Uncharacterized conserved protein (DUF2358) |
| NR | XP_004510046.1 | 8.52E-99 | PREDICTED: uncharacterized protein LOC101502808 [Cicer arietinum] |
| trEMBL | tr|I1MJD4|I1MJD4_SOYBN | 1.00E-96 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G41610.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00196 | 124612 | 127730 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000196s00010869.1 | PF10184.4 | DUF2358 | 2 | 83 | 1.10E-24 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.975 |
| SRR1783600 | control | 2.946 |
| SRR1783602 | moderate drought stress | 3.172 |
| SRR1811619 | moderate drought stress | 3.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.457 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.294 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 17.135 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 16.784 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.801 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.787 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 22.604 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 22.534 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.283 |
| SRR2868004 | Drought Stress (root) | 9.232 |
| SRR2967015 | Control (root) | 7.882 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 25.079 |
| SRR9715740 | Leaf | 38.658 |
| SRR9715741 | Leaf | 26.801 |
| SRR9715739 | Root | 2.482 |
| SRR9715742 | Root | 2.605 |
| SRR9715743 | Root | 3.103 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.996 |
| SRR8749028 | MeJA induced 9h | 3.819 |
| SRR8749029 | MeJA induced 9h | 3.365 |
| SRR8749030 | Uninduced | 2.565 |
| SRR8749031 | Uninduced | 4.010 |
| SRR8749032 | Uninduced | 3.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.390 |
| SRR8400027 | Control - Root | 6.312 |