Gene detail information of Glyur000195s00012868 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23750.2 | 4.00E-05 | Remorin family protein |
| NR | AFK42693.1 | 9.51E-26 | unknown [Lotus japonicus] |
| Swissprot | tr|P93788|REMO_SOLTU | 2.00E-06 | Remorin |
| trEMBL | tr|I3SR01|I3SR01_LOTJA | 4.00E-26 | Uncharacterized protein {ECO:0000313|EMBL:AFK42693.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00195 | 247370 | 249633 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.848 |
| SRR1783600 | control | 6.577 |
| SRR1783602 | moderate drought stress | 8.918 |
| SRR1811619 | moderate drought stress | 8.863 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.797 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.909 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 14.824 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 14.605 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 19.558 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 17.298 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.747 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.819 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.700 |
| SRR2868004 | Drought Stress (root) | 21.767 |
| SRR2967015 | Control (root) | 33.320 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.895 |
| SRR9715740 | Leaf | 13.052 |
| SRR9715741 | Leaf | 9.146 |
| SRR9715739 | Root | 2.897 |
| SRR9715742 | Root | 10.488 |
| SRR9715743 | Root | 8.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 159.395 |
| SRR8749028 | MeJA induced 9h | 113.175 |
| SRR8749029 | MeJA induced 9h | 152.956 |
| SRR8749030 | Uninduced | 68.079 |
| SRR8749031 | Uninduced | 33.310 |
| SRR8749032 | Uninduced | 43.175 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.975 |
| SRR8400027 | Control - Root | 15.574 |