Gene detail

Gene detail information of Glyur000195s00012842

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G51920.1	1.00E-134	Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
NR	XP_003516686.1	0	PREDICTED: molybdenum cofactor sulfurase-like [Glycine max]
COG	NP_616873.1	1.00E-45	hypothetical protein MA1950 [Methanosarcina acetivorans C2A]
Swissprot	tr\|Q8LGM7\|MOCOS_SOLLC	2.00E-16	Molybdenum cofactor sulfurase {ECO:0000255\|HAMAP-Rule:MF_03050}
trEMBL	tr\|K7K550\|K7K550_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA01G42460.2}

Sequence

Transcript Sequence

>Glyur000195s00012842.1
ATGCAACCACCTTGCTATAACACTTGTTTTACTCCCAAATCCAGTTCAAGCCTTGACTTGGAATCAATAGCATCCACATCTTGCAATCTTCACCCGCATACCCAATTCACCAATCATGAGGCACTCCCTTCTTTGGAAGAATCATATGNTAACTTCACCAACACATACCCTTCATTTAGCGATACTTCTGAAGTTGATCGTATTCGAGCACAAGAATACCATCACTTGAATCACTCCAACATTTGCTTTGATTACACNGGATATGGCCTTTTCTCCTATGCTCAGGTGCAAAGTAGACACTTTCCGAAAACAACTTCAATTGCTTCTACATCNTCTTGTCCTCCTCCTCTTCCATCATTGCCTTACTCTGCTTTTGAACTACCCTTGTTTGTTATCTCCCACAAGCCGGTGAATTTGCATGNTCAATTGCGCTATGGTGGCCAGGAATCAGAACTAGAATCCAAAATCAGAGAAAGAATCATGGGGTTCATGAATATCTCCGAAGCTGAATACACCATGGTTTTCACTGCCAATGAGGTATCTGCCTTTAAACTCATAGCAGATTCTTTCCAATTTGAATCTGATATTGGAGAACTCCTCACAGTATATGACCACGAGAGCGAGGCACTGGATGTGATGGTTGAGTCCTNCAAGGAGCAAGGAGCACGTGTCTCTTCAGCTGAGTTCACCTGGCCCAATCTTGNAATCAACTGCAGAAAACTGAAGAAGATGATAATTAGCAAAAGGGGGAAGAGAAAAAGAGGTCTTTTTGTTTTACCACTTCACTCAAGGGTCACTGGGGCACCATATTCATATGTTTGGATGTCATTGGCACAAGAAAATGGTTGGTATGTCTTGGTTGATGCATGTGCATTGGGACCTAAGGAGATGGACACCTTGGGTCTCACACTGTTTAAGCCTGATTTTATGGTTTGTTCCTTTTACAAGGTCTTTGGTGAGAACCCATCAGGTTTTGGGTGCTTATTTGTCAAGAAATCTAGTATCTCTTCTCTCAAAGAGTCATGCAATTATCNTACAAGCATGGGAATTGTTAGCCTCTTTCCTCAGCTACCTCATGAAGAGTTTGAACCCAAAGCAAGTACTGAATTGCAAGAAAATGAATCACTGTCATCAGAGATTGTGGAGTTAAACACATCCCTTGATCAGTTAGACTCAGCACAATCTAGAAAAGGATTAGAGATTGAGTGTAGAGGATTGGATCATGCAGACTCAGTGGGGCTAATACTGATTAGTTGCAGGGGTAGGTGTCTTNTCACTTGGCTAGTGAATGCGTTAATGAGTCTTCAACATCCACATCCTCAAACTGGGCTTTCCCTAATTAGGATATATGGNCCAAAGATGAATTCACACCGTGGACCTGTTGTGGCATTCAATGTGTTTGATTGGAAAGGAGAAAAGGTTGATCCGGGAATTGTACAGAAGCTAGCAGATAGGAACAATGTCTCTTTAAGTTGTGGAGTTGTGCAAAACATGCGGTTCTCGGATAAGAATGAACAAGAGAGAGAGAGGGCTATAGAAAGACGAGTGTGTGGTGATGAGGGGAATGGGTTGGGCCAATCTANTAAGACTCGAGCCCATGATATTTTTGGGATAAAAGTGGTGACAGCTGCACTTGGTTTCTTGACAAACTTTGAAGATGTATACAGATTATGGTCTTTTCTTTCTAGGTTCCTGGATGCTGACTTTGTGGAGAAAGAGAGATGGCGATACATGGCTCTAAATCAGAAGACCATAGATATATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00195	77489	79252	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function

GO:0003824 catalytic activity

GO:0030170 pyridoxal phosphate binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--	--

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.243
SRR1783600	control	0.250
SRR1783602	moderate drought stress	0.151
SRR1811619	moderate drought stress	0.108

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.106
DRR006520	Root Summer glycyrrhizin high producing strain	1.093
DRR006521	Root Winter glycyrrhizin high producing strain	0.063
DRR006522	Root Winter glycyrrhizin high producing strain	0.062
DRR006523	Root Summer glycyrrhizin low producing strain	0.625
DRR006524	Root Summer glycyrrhizin low producing strain	0.625
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.833
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.765

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.152
SRR2868004	Drought Stress (root)	0.525
SRR2967015	Control (root)	0.856

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	4.857
SRR9715740	Leaf	4.811
SRR9715741	Leaf	2.992
SRR9715739	Root	0.096
SRR9715742	Root	3.060
SRR9715743	Root	2.544

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.114
SRR8749029	MeJA induced 9h	0.069
SRR8749030	Uninduced	0.213
SRR8749031	Uninduced	0.130
SRR8749032	Uninduced	0.032

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.452
SRR8400027	Control - Root	3.003