Gene detail

Gene detail information of Glyur000194s00016351

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT3G25500.1	formin homology 1
NR	XP_003529900.1	PREDICTED: formin-like protein 1-like [Glycine max]
Swissprot	tr\|Q9SE97\|FH1_ARATH	Formin-like protein 1 (Precursor)
trEMBL	tr\|K7MEX0\|K7MEX0_SOYBN	Formin-like protein {ECO:0000256\|RuleBase:RU361260}

Sequence

Transcript Sequence

>Glyur000194s00016351.1
GCAAAACACAAGGACAAGCAGAATCTTAGCTGGATCCACCACTACCCGGATTTTACCCCATCTCTTTTTATTTTTCTTTTCAACCTTTTCACACTCTCTCCTTTCTCACTCCCAACCCAAACATTGAACAAATCTCTATTCCTCCTCCTCCTCCTCCTCCTCCATCACTGCCTCTCACTCTCTCTCTCTACACACTCACACCCATTCACTTTTAGAAAGAGAGAGAGAAAGAAAGAGAAGAACACACAGTCACACACCAACACCAGCAACAGCAACACAATGTGCAGCAGCTTCTTCTTCTGCATCTTCTTCAGCTTCACCCTCTTCTTCATTTCTGCATCAGAACCCATCACCAACAGGAGGATCCTCCACCAACCCTTTCTCCCACAGGACTCTCTCCCTCCCTCTCAACCCCCAAACCCTCCTCCACCTTCTCCTTCTCCTTCTCCTTCACCACCAAACCCAAAGTACCCATTTTCCACAACACCCACTACCCCTAATGCCTCCTCAACACCAACACCCTTCTTCCCCACATACCCATCTCCACCACCTCCTCCTTCTCCTTCCACCTTCGCTTCTTTCCCAGCAAACATCTCCTCCCTCATCCTTCCCCAGTCTCCCAAACCCAAATCTTCCTCCGGCAAACTCGCCGGCGTTGCCATTGCCGCCGTCGCCTGCGCCGTCGTCGTTGTCGCACTCTCCGCCTTCGTCTACTGCCGACGAAGACGCCGGAAGAGCTACTCCGCCGACGATAAGACCCTCAGATCCGACAGCAGCATCCGCCTCTTCCCCCGCGAAGCCGCCGGNGCCGGCAACAACCGGAAGTCGAGGAACGTCTCTAACACGAGCTCCGAGTTTCTCTACCTCGGCACTATTGTCAACTCCTGCGGCGACGATCTGCCCGATCCTCGCGGCGGTGGTGCTGCTGTGAATCCCCGGAAAATGGACTCGCCGGAGCTTCAGCCACTACCGCCGTTGGCGCGTCAAGCTTCGAGGCTTCACGACGAGGCACTAGCGGCGGTGGAGGATGAAGAGGAGGAGTTTTACTCNCCGAGAGGGTCTTTGAATGGCCGNGAGAGCTCCAACGGTAACGGATCGGGTTCTCGTAGGGTGTTCGCCGGTATTGCAGCTGAGAATTTCGTGGGCAGAAGCAGCACCGAGTCCACTACCTCATCTTCTTACTCTTCTTCCTCTTCTGCTTCCCCGGATCGGTCACACTCCATCAGCCTCTCGCCGCCGGTGAGCATAAGCCCCAGAAGATCACATCCCAAGTCGCCGGAAACCGAACTAGCTCANCATTCTCCACCACCTCCTCCGCCACAAACACAACCACTTGCTTCCTCTGGCGACGGCAGAAGCTCGTTGTCCTCATCAACACTATCCTCCCCGCGAGCTTCGTCAAACCGGCANACAATCTCTTCTTCAATGTCCTCCACGCCGGAGCGACCCTTCGCCGCCGGAGAGTGTCAGTCNCCGTCGCTATCACCGCTCTCCCTTTCACCGACAAAAATCCCAGATGGGTCCATTGCTGCACTAAAAAAGTCTCAGTCTTGTCGTTCATCTCCGAAGAAAAACGAAGACGCTGCTTCGCCAAGACTNTCCAATGCTTCTTCAAGCAGCAAGTCGGTGTCTTCTTCTTCGGCGTTTTCTCTGCCGTCGCCGGATAAACTGTCGGTGATGCATCATCATCATGGGTTGGATCAGTCTCCAACTATATCAGATGTCTCAGATCGGTATAGGCACTCTCCTCTTTCATCACTGCCTCTGTCACCGACTCTGCTTTCGTCGCCGGAGAGAGAGTTGAACCACACTCAACCAGCACCAGCACCTTCTCGGAAGCATTGGGAGATTCCAGACCTCTTAACACCACCCATTGGTGAATCANCCGTTTTGCTTCAACATGGGGTGTCTCAAAGGAAACACTGGGAAATTCCGGTTCTTNCAACACCACCCCTTGCACCTTCTATTAGAGTTTCAGCCCCGCCCCCACCACCGCCGCCACCACCGCCACTTCCGAGGCAGAGGAAGCAGTGGGAAGTGCCTTCTCCCTCGACGCCGGNCGGCCAACCGGTTGTTTCGAGGCTGCCGGAACTGAAGCCTCCTTCGAGGCCTTTTGTGTTGCAAACCCCAAATACAAAGGTTTCTCCTGTTGAGTTGCCACCGAGTTCTGAGACTCTTGGGGTGATTGAGGAGAGTTCTGAGGAGGCATCTAAGCCAAAGTTGAAGCCTTTGCATTGGGACAAAGTGAGGGCAAGCTCTGATCGTGAAATGGTGTGGGATCAGTTGAGGTCCAGCTCTTTCAAGTTGAATGAGGAAATGATAGAAACGTTGTTTGTGGTGAACACACCGAATCCAAAACCCAAGGATTCAACTCCACGTTCAGTTCTTGCCCCGCAAAATCAGGAGGATAGGGTGTTGGATCCTAAAAAGTCCCAAAACATTGCTATCTTGCTCAGAGCGCTTAATGTGACTATTGAGGAAGTGTGTGAAGCACTGTTAGAAGGTATCACTGATACACTTGGAACTGAACTACTTGAAAGCTTGTTAAAAATGGCACCAAGCAAGGAAGAAGAACGTAAACTGAAGGAACATAAAGATGACTCTCCAACCAAACTAGGTCCTGCTGAGAAATTCTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGGTGGAAGCTATGCTTTACATAGCCAATTTTGAGTCCGAAGTGGAGTATCTTAGGAAATCCTTTCAAACTCTCGAGGCTGCCTGTGAAGAGCTGCGGAACAGTAGAATGTTCTTGAAGCTTCTAGAGGCCGTGCTTAAAACCGGNAACCGCATGAATGTGGGGACAAACCGTGGCGATGCACATGCGTTCAAGCTNGATACACTTCTCAAGCTGGTTGATGTCAAGGGCGCGGATGGGAAAACCACTCTTCTGCACTTTGTCGTACAAGAAATCATTAGAACCGAAGGGGCTCGTCTCTCAGGTACTNCTACTACTAATCAAACTCCAAGCACAACTTCGAGCGAAGATGCCAAGTGTAGGAGGCTTGGCCTGCAAGTAGTATCTAGCCTAAGTTCCGACCTAGCGAATGTGAAGAAGGCCGCAGCCATGGACTCCGAAGTTCTNACCAGTGACGTCTCTAAACTTTCCAAAGGAATCGCACAGATTGTAGAGATTGTGCGATTGATTGAAACGGCGGGGTCAGATGAAAGCAGTCAGAAATTCACAGAATCAATGAACAGGTTCATGAGGATGGCAGAGGAGGAGATTCTGAGGATTCAAGCCCAAGAAAGTGTTGCTTTATCCCTTGTGAAGGAGATCACAGAGTATTTCCATGGGAACTTGTCTAAGGAAGAAGCTCATCCATTCAGAATCTTCAATNTAGTAAGAGACTTCTTAACAGTTCTTGACAGGGTGTGCAAAGAGGTTGGTAATATAAATGAGAGGACCATGGTAAGTTCTGCCCATAGATTTCCTGTTCCAGTGAACCCCATGCTTCCACAACCACTTCCTGGTCTAACACATGGAAGGAGACAGTACAGCTCCTCAGATGATGATGATAGTTCATCTCCTTAGCTGTATAATATCTCATTGGTGTCACTGTGACACATCTTGGCTGCATCTTCTGCTAGAAAACACAACCTGGAAGAGCCAGGTGATTTTGATGGGGTCATGGGGTGCTGCACTTATGGTCTGGCCCTAACGATTTTTTTTCCCTTGTTAAATTGTAAAAATCCTTGTAAAAGATTATATAAAATAGATTATATATGAGTAGAAGATTTTCTTTTTGGTAAAAATAAGCTGTGCCTTTTATGAACAGGATGTGTAT

Protein Sequence

>Glyur000194s00016351.1
MCSSFFFCIFFSFTLFFISASEPITNRRILHQPFLPQDSLPPSQPPNPPPPSPSPSPSPPNPKYPFSTTPTTPNASSTPTPFFPTYPSPPPPPSPSTFASFPANISSLILPQSPKPKSSSGKLAGVAIAAVACAVVVVALSAFVYCRRRRRKSYSADDKTLRSDSSIRLFPREAAGAGNNRKSRNVSNTSSEFLYLGTIVNSCGDDLPDPRGGGAAVNPRKMDSPELQPLPPLARQASRLHDEALAAVEDEEEEFYSPRGSLNGRESSNGNGSGSRRVFAGIAAENFVGRSSTESTTSSSYSSSSSASPDRSHSISLSPPVSISPRRSHPKSPETELAXHSPPPPPPQTQPLASSGDGRSSLSSSTLSSPRASSNRXTISSSMSSTPERPFAAGECQSPSLSPLSLSPTKIPDGSIAALKKSQSCRSSPKKNEDAASPRLSNASSSSKSVSSSSAFSLPSPDKLSVMHHHHGLDQSPTISDVSDRYRHSPLSSLPLSPTLLSSPERELNHTQPAPAPSRKHWEIPDLLTPPIGESXVLLQHGVSQRKHWEIPVLXTPPLAPSIRVSAPPPPPPPPPPLPRQRKQWEVPSPSTPXGQPVVSRLPELKPPSRPFVLQTPNTKVSPVELPPSSETLGVIEESSEEASKPKLKPLHWDKVRASSDREMVWDQLRSSSFKLNEEMIETLFVVNTPNPKPKDSTPRSVLAPQNQEDRVLDPKKSQNIAILLRALNVTIEEVCEALLEGITDTLGTELLESLLKMAPSKEEERKLKEHKDDSPTKLGPAEKFLKAVLDVPFAFKRVEAMLYIANFESEVEYLRKSFQTLEAACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRTEGARLSGTXTTNQTPSTTSSEDAKCRRLGLQVVSSLSSDLANVKKAAAMDSEVLTSDVSKLSKGIAQIVEIVRLIETAGSDESSQKFTESMNRFMRMAEEEILRIQAQESVALSLVKEITEYFHGNLSKEEAHPFRIFNXVRDFLTVLDRVCKEVGNINERTMVSSAHRFPVPVNPMLPQPLPGLTHGRRQYSSSDDDDSSSP

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00194	214347	219086	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000194s00016351.1	PF02181.18	FH2	640	1040	3.40E-123

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	118.804
SRR1783600	control	119.340
SRR1783602	moderate drought stress	121.934
SRR1811619	moderate drought stress	121.415

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	82.486
DRR006520	Root Summer glycyrrhizin high producing strain	81.787
DRR006521	Root Winter glycyrrhizin high producing strain	10.242
DRR006522	Root Winter glycyrrhizin high producing strain	10.090
DRR006523	Root Summer glycyrrhizin low producing strain	70.786
DRR006524	Root Summer glycyrrhizin low producing strain	70.274
DRR006525	Leaf Summer glycyrrhizin high producing strain	8.073
DRR006526	Leaf Summer glycyrrhizin high producing strain	8.154

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	63.523
SRR2868004	Drought Stress (root)	42.990
SRR2967015	Control (root)	53.078

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	10.469
SRR9715740	Leaf	6.781
SRR9715741	Leaf	6.925
SRR9715739	Root	53.963
SRR9715742	Root	106.233
SRR9715743	Root	94.425

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	37.146
SRR8749028	MeJA induced 9h	29.851
SRR8749029	MeJA induced 9h	20.232
SRR8749030	Uninduced	17.219
SRR8749031	Uninduced	1.850
SRR8749032	Uninduced	2.991

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	84.887
SRR8400027	Control - Root	99.076