Gene detail information of Glyur000194s00016341 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46380.1 | 3.00E-129 | Protein of unknown function (DUF3133) |
| NR | XP_004516395.1 | 0 | PREDICTED: uncharacterized protein At5g05190-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|O80462|XLG1_ARATH | 4.00E-10 | Extra-large guanine nucleotide-binding protein 1 |
| trEMBL | tr|A0A072TIQ8|A0A072TIQ8_MEDTR | 0 | Extra-large G-like protein {ECO:0000313|EMBL:KEH17297.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00194 | 130620 | 136295 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000194s00016341.1 | PF11331.3 | DUF3133 | 495 | 539 | 2.40E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 16.504 |
| SRR1783600 | control | 16.534 |
| SRR1783602 | moderate drought stress | 23.708 |
| SRR1811619 | moderate drought stress | 23.736 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.065 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 21.020 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.144 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.716 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.784 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 37.123 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.136 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 12.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.724 |
| SRR2868004 | Drought Stress (root) | 23.440 |
| SRR2967015 | Control (root) | 17.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 105.264 |
| SRR9715740 | Leaf | 52.906 |
| SRR9715741 | Leaf | 128.228 |
| SRR9715739 | Root | 17.405 |
| SRR9715742 | Root | 57.088 |
| SRR9715743 | Root | 46.463 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.449 |
| SRR8749028 | MeJA induced 9h | 20.863 |
| SRR8749029 | MeJA induced 9h | 13.966 |
| SRR8749030 | Uninduced | 47.210 |
| SRR8749031 | Uninduced | 10.382 |
| SRR8749032 | Uninduced | 9.709 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.486 |
| SRR8400027 | Control - Root | 20.823 |