Gene detail information of Glyur000194s00016338 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01430.1 | 5.00E-140 | TRICHOME BIREFRINGENCE-LIKE 25 |
| NR | XP_004516393.1 | 0 | PREDICTED: uncharacterized protein LOC101499675 isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q84JH9|TBL25_ARATH | 7.00E-179 | Protein trichome birefringence-like 25 |
| trEMBL | tr|I1MKL4|I1MKL4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G02980.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00194 | 119600 | 123738 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000194s00016338.1 | PF14416.1 | PMR5N | 98 | 151 | 9.40E-22 |
| Glyur000194s00016338.1 | PF13839.1 | PC-Esterase | 152 | 446 | 7.40E-67 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.882 |
| SRR1783600 | control | 7.796 |
| SRR1783602 | moderate drought stress | 13.724 |
| SRR1811619 | moderate drought stress | 13.644 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.782 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.730 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.353 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.404 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.496 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.126 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.336 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.142 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.886 |
| SRR2868004 | Drought Stress (root) | 5.125 |
| SRR2967015 | Control (root) | 4.729 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.070 |
| SRR9715740 | Leaf | 12.580 |
| SRR9715741 | Leaf | 7.325 |
| SRR9715739 | Root | 2.198 |
| SRR9715742 | Root | 3.705 |
| SRR9715743 | Root | 2.485 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.424 |
| SRR8749028 | MeJA induced 9h | 0.106 |
| SRR8749029 | MeJA induced 9h | 0.403 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.162 |
| SRR8749032 | Uninduced | 0.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.705 |
| SRR8400027 | Control - Root | 10.468 |