Gene detail information of Glyur000194s00016337 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46390.1 | 7.00E-06 | |
| NR | XP_010255931.1 | 3.26E-18 | PREDICTED: uncharacterized protein LOC104596457 isoform X1 [Nelumbo nucifera] |
| trEMBL | tr|K4B090|K4B090_SOLLC | 9.00E-18 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc01g097020.2.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00194 | 117533 | 120568 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.322 |
| SRR1783600 | control | 7.252 |
| SRR1783602 | moderate drought stress | 6.834 |
| SRR1811619 | moderate drought stress | 6.719 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 36.155 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 39.309 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.351 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.774 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.823 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 46.231 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 53.027 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 52.955 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 267.269 |
| SRR2868004 | Drought Stress (root) | 236.263 |
| SRR2967015 | Control (root) | 190.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 102.184 |
| SRR9715740 | Leaf | 107.584 |
| SRR9715741 | Leaf | 112.576 |
| SRR9715739 | Root | 96.144 |
| SRR9715742 | Root | 68.365 |
| SRR9715743 | Root | 78.711 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 24.070 |
| SRR8749028 | MeJA induced 9h | 21.253 |
| SRR8749029 | MeJA induced 9h | 23.141 |
| SRR8749030 | Uninduced | 18.505 |
| SRR8749031 | Uninduced | 9.537 |
| SRR8749032 | Uninduced | 24.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 184.221 |
| SRR8400027 | Control - Root | 208.977 |