Gene detail information of Glyur000194s00016327 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G08391.1 | 1.00E-25 | Protein of unknown function (DUF 3339) |
| NR | KEH18682.1 | 3.39E-39 | transmembrane protein, putative [Medicago truncatula] |
| trEMBL | tr|A0A072TMN4|A0A072TMN4_MEDTR | 1.00E-39 | Transmembrane protein, putative {ECO:0000313|EMBL:KEH18682.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00194 | 73214 | 73931 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000194s00016327.1 | PF11820.3 | DUF3339 | 1 | 67 | 1.80E-32 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.569 |
| SRR1783600 | control | 2.939 |
| SRR1783602 | moderate drought stress | 1.485 |
| SRR1811619 | moderate drought stress | 2.005 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.219 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.902 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.376 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.782 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.629 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.077 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.549 |
| SRR2868004 | Drought Stress (root) | 8.532 |
| SRR2967015 | Control (root) | 4.646 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.829 |
| SRR9715740 | Leaf | 1.170 |
| SRR9715741 | Leaf | 0.345 |
| SRR9715739 | Root | 0.787 |
| SRR9715742 | Root | 2.673 |
| SRR9715743 | Root | 2.099 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.086 |
| SRR8400027 | Control - Root | 2.137 |