Gene detail information of Glyur000193s00013984 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27830.1 | 3.00E-40 | |
| NR | XP_004487530.1 | 5.05E-83 | PREDICTED: uncharacterized protein At4g22758-like [Cicer arietinum] |
| Swissprot | tr|Q56XJ7|Y4276_ARATH | 1.00E-16 | Uncharacterized protein At4g22758 |
| trEMBL | tr|I1LTR5|I1LTR5_SOYBN | 1.00E-75 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA12G30620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00193 | 200295 | 201932 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 62.174 |
| SRR1783600 | control | 63.229 |
| SRR1783602 | moderate drought stress | 59.494 |
| SRR1811619 | moderate drought stress | 58.840 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 65.870 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 65.059 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 79.814 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 77.781 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 207.896 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 209.758 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 40.458 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 39.865 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 71.402 |
| SRR2868004 | Drought Stress (root) | 76.775 |
| SRR2967015 | Control (root) | 122.861 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 384.083 |
| SRR9715740 | Leaf | 274.713 |
| SRR9715741 | Leaf | 490.779 |
| SRR9715739 | Root | 583.627 |
| SRR9715742 | Root | 583.232 |
| SRR9715743 | Root | 578.684 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 43.716 |
| SRR8749028 | MeJA induced 9h | 76.876 |
| SRR8749029 | MeJA induced 9h | 24.734 |
| SRR8749030 | Uninduced | 17.613 |
| SRR8749031 | Uninduced | 5.411 |
| SRR8749032 | Uninduced | 11.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 56.833 |
| SRR8400027 | Control - Root | 47.145 |