Gene detail information of Glyur000193s00013977 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KGN64898.1 | 1.12E-30 | hypothetical protein Csa_1G148480 [Cucumis sativus] |
| trEMBL | tr|A0A0A0LSY2|A0A0A0LSY2_CUCSA | 4.00E-31 | Uncharacterized protein {ECO:0000313|EMBL:KGN64898.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00193 | 160034 | 160725 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.915 |
| SRR1783600 | control | 17.994 |
| SRR1783602 | moderate drought stress | 23.012 |
| SRR1811619 | moderate drought stress | 23.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.805 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 29.823 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.917 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.772 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 43.726 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 45.239 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 29.769 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 31.772 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.985 |
| SRR2868004 | Drought Stress (root) | 0.025 |
| SRR2967015 | Control (root) | 0.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.011 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 6.657 |
| SRR9715743 | Root | 5.272 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.669 |
| SRR8749028 | MeJA induced 9h | 19.380 |
| SRR8749029 | MeJA induced 9h | 13.948 |
| SRR8749030 | Uninduced | 14.280 |
| SRR8749031 | Uninduced | 6.589 |
| SRR8749032 | Uninduced | 24.799 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.003 |
| SRR8400027 | Control - Root | 0.076 |