Gene detail information of Glyur000193s00013972 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27770.1 | 8.00E-80 | Plant protein of unknown function (DUF868) |
| NR | XP_007150100.1 | 4.93E-155 | hypothetical protein PHAVU_005G126700g [Phaseolus vulgaris] |
| trEMBL | tr|V7BVU0|V7BVU0_PHAVU | 2.00E-155 | Uncharacterized protein {ECO:0000313|EMBL:ESW22094.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00193 | 113017 | 114021 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000193s00013972.1 | PF05910.7 | DUF868 | 40 | 332 | 3.20E-90 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.231 |
| SRR1783600 | control | 2.259 |
| SRR1783602 | moderate drought stress | 1.335 |
| SRR1811619 | moderate drought stress | 1.101 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.041 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.033 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.260 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.433 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.028 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.931 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.670 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.609 |
| SRR2868004 | Drought Stress (root) | 2.126 |
| SRR2967015 | Control (root) | 1.797 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.862 |
| SRR9715740 | Leaf | 0.081 |
| SRR9715741 | Leaf | 0.322 |
| SRR9715739 | Root | 0.022 |
| SRR9715742 | Root | 0.181 |
| SRR9715743 | Root | 0.205 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.478 |
| SRR8749028 | MeJA induced 9h | 2.403 |
| SRR8749029 | MeJA induced 9h | 0.483 |
| SRR8749030 | Uninduced | 2.606 |
| SRR8749031 | Uninduced | 0.539 |
| SRR8749032 | Uninduced | 0.330 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.553 |
| SRR8400027 | Control - Root | 4.637 |