Gene detail information of Glyur000193s00013971 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G44716.2 | 3.00E-11 | |
| NR | KHN38662.1 | 1.62E-99 | hypothetical protein glysoja_008211 [Glycine soja] |
| trEMBL | tr|I1LKV3|I1LKV3_SOYBN | 8.00E-100 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G19370.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00193 | 108757 | 109729 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.242 |
| SRR1783600 | control | 2.221 |
| SRR1783602 | moderate drought stress | 2.197 |
| SRR1811619 | moderate drought stress | 2.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.189 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.216 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.437 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.354 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.348 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.651 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.107 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.460 |
| SRR2868004 | Drought Stress (root) | 6.347 |
| SRR2967015 | Control (root) | 6.512 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.690 |
| SRR9715740 | Leaf | 0.368 |
| SRR9715741 | Leaf | 0.244 |
| SRR9715739 | Root | 1.297 |
| SRR9715742 | Root | 2.132 |
| SRR9715743 | Root | 1.672 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.367 |
| SRR8749028 | MeJA induced 9h | 0.300 |
| SRR8749029 | MeJA induced 9h | 0.675 |
| SRR8749030 | Uninduced | 0.518 |
| SRR8749031 | Uninduced | 1.849 |
| SRR8749032 | Uninduced | 0.547 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.450 |
| SRR8400027 | Control - Root | 11.545 |