Gene detail information of Glyur000193s00013967 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36410.2 | 2.00E-39 | Family of unknown function (DUF662) |
| NR | XP_004487521.1 | 2.91E-97 | PREDICTED: RAB6-interacting golgin-like [Cicer arietinum] |
| trEMBL | tr|I3S567|I3S567_LOTJA | 5.00E-92 | Uncharacterized protein {ECO:0000313|EMBL:AFK35409.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00193 | 79503 | 81493 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000193s00013967.1 | PF04949.8 | Transcrip_act | 12 | 169 | 2.20E-73 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.344 |
| SRR1783600 | control | 4.452 |
| SRR1783602 | moderate drought stress | 10.417 |
| SRR1811619 | moderate drought stress | 10.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.579 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.168 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.093 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.061 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.235 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.512 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.895 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.611 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 42.205 |
| SRR2868004 | Drought Stress (root) | 27.255 |
| SRR2967015 | Control (root) | 32.331 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.724 |
| SRR9715740 | Leaf | 0.787 |
| SRR9715741 | Leaf | 1.711 |
| SRR9715739 | Root | 0.656 |
| SRR9715742 | Root | 6.778 |
| SRR9715743 | Root | 4.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.975 |
| SRR8749028 | MeJA induced 9h | 0.873 |
| SRR8749029 | MeJA induced 9h | 0.646 |
| SRR8749030 | Uninduced | 0.438 |
| SRR8749031 | Uninduced | 0.697 |
| SRR8749032 | Uninduced | 0.732 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 26.265 |
| SRR8400027 | Control - Root | 26.161 |