Gene detail information of Glyur000193s00013963


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G27710.39.00E-2060S acidic ribosomal protein family
NRKEH38965.18.93E-4060S acidic ribosomal protein [Medicago truncatula]
Swissprottr|O24415|RLA2B_MAIZE7.00E-3160S acidic ribosomal protein P2B
trEMBLtr|A0A072VLF0|A0A072VLF0_MEDTR3.00E-4060S acidic ribosomal protein {ECO:0000313|EMBL:KEH38965.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold001934493246508+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006414  translational elongation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur000193s00013963.1PF00428.14Ribosomal_60s171148.30E-26


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control23.312
SRR1783600control23.758
SRR1783602moderate drought stress25.302
SRR1811619moderate drought stress25.618

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain145.476
DRR006520Root Summer glycyrrhizin high producing strain143.834
DRR006521Root Winter glycyrrhizin high producing strain96.482
DRR006522Root Winter glycyrrhizin high producing strain93.921
DRR006523Root Summer glycyrrhizin low producing strain164.346
DRR006524Root Summer glycyrrhizin low producing strain165.095
DRR006525Leaf Summer glycyrrhizin high producing strain39.854
DRR006526Leaf Summer glycyrrhizin high producing strain39.843

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)405.109
SRR2868004Drought Stress (root)228.942
SRR2967015Control (root)224.536

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf134.884
SRR9715740Leaf112.115
SRR9715741Leaf106.390
SRR9715739Root276.107
SRR9715742Root159.569
SRR9715743Root187.164

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h302.028
SRR8749028MeJA induced 9h152.201
SRR8749029MeJA induced 9h175.506
SRR8749030Uninduced50.010
SRR8749031Uninduced19.189
SRR8749032Uninduced67.638

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root342.329
SRR8400027Control - Root276.782

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved