Gene detail information of Glyur000193s00013961 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G29350.1 | 8.00E-12 | histidine-containing phosphotransmitter 2 |
| NR | XP_006424282.1 | 4.81E-11 | hypothetical protein CICLE_v10029511mg [Citrus clementina] |
| trEMBL | tr|V4RSF6|V4RSF6_9ROSI | 2.00E-11 | Uncharacterized protein {ECO:0000313|EMBL:ESR37523.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00193 | 24252 | 39922 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.096 |
| SRR1783600 | control | 8.671 |
| SRR1783602 | moderate drought stress | 15.481 |
| SRR1811619 | moderate drought stress | 13.504 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.031 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.657 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.756 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.893 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.558 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.591 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.386 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.221 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.416 |
| SRR2868004 | Drought Stress (root) | 10.485 |
| SRR2967015 | Control (root) | 10.045 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.025 |
| SRR9715740 | Leaf | 2.783 |
| SRR9715741 | Leaf | 4.874 |
| SRR9715739 | Root | 1.428 |
| SRR9715742 | Root | 3.805 |
| SRR9715743 | Root | 2.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.575 |
| SRR8749028 | MeJA induced 9h | 20.585 |
| SRR8749029 | MeJA induced 9h | 10.352 |
| SRR8749030 | Uninduced | 38.360 |
| SRR8749031 | Uninduced | 15.807 |
| SRR8749032 | Uninduced | 21.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.659 |
| SRR8400027 | Control - Root | 12.916 |