Gene detail

Gene detail information of Glyur000192s00009361

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT1G22930.1	T-complex protein 11
NR	AES63246.2	T-complex protein [Medicago truncatula]
trEMBL	tr\|G7INR8\|G7INR8_MEDTR	T-complex protein {ECO:0000313\|EMBL:AES63246.2}

Sequence

Transcript Sequence

>Glyur000192s00009361.1
TCTCTCTCTACTTTCTCTCTCTTGAAACGAAACTCAAACCAAAAAAACGAAGCTCTTAAAGCTGGGTTCACTCGTCGCAACGTTTCTCTTTTGAATCGTTTCGAATTCGATTTTCCACTGTTTTATTTTCCCCTTCTCTGTTTGTGTGTATATATATACACTCATCACCGATCATCGATCGTTGTTATTGTATTCGTCGTTGCGATTATTTTTTGTTCGTACGGTACGACGTCGTTGGTGAGAATTCATCGTCGTCGCGGTTGTACGAAGGGATTGATCGCTGTGTCGTCGTGTTGTTGAAGGATGGCGGCCGGAGTGGAGTTGCCGGANGGGAGAGCCAGCGGTGGCGGGGGAGTTGTGATGGAATTCCCGGTCGGCGAAGAGGAATCCCTGTCGTCGCCGGCGAGGTTGCCGAAGAGACTCCGGCGACGGCTTCTAGACGCGGAGTGCAAGTCCCCAAGCACGGTGGAGGAAATCGAGGCCAAGCTCCGCGACGCTGATCTTCGCAGACAGAAATACTATGAGAAACTCTCGAGCAAGGCACGTGCAAAGCCAAGAAGCCCTTCACGATGTTCATCTCAGGATGAAGATCTTGGTCAGCGACTAGAAGCGAAGCTGCAAGCTGCTGAACAGAAAAGGTTAAGCATTTTGACAAAGGCCCAGATGCGCTTAGCAAGGCAGGATGAATTGCGTCAAGCAGCAAAAACTGGAGTTGAAATGCGCCATGCCAGTGAACGTGTGAAGCTTGGGACAAAAGTGGAATCACGTGTTCAGCAAGCAGAGGCAAATAGGATGCTTATCCTCAAGGCTCACAGGCAAAGAAGAGCATCTCTTAGGGAAAGGTCATNTCAGTCATTGATGAGGAGAATGGCTCGAGAGAGCAAATATAAGGAGTGTGTGCGTGCTGCAATTAACCAAAAACGAGCTGCTGCTGAAACAAAACGACTTGGTTTGCTGGAAGCTGAGAAGAAGAAGGCACATGCTCGAGTCTTGCAAGTGACACATAAGGCCAAGTCTGTATCTCACCAGCGTGAGATTGAGAGAAGGAAAAAGAAGGATGAGTTGGAAAATCGACTACAAAGGGCAAAAAGACAAAGGGCTGAATATCTCAGGCACAGGGGAAGGATGCGTGATTATGCAGGAGAGAATTGGATTAGAATGTCAAAACAAGCAGAATATCTTTCCAGAAAACTAGCAAGGTGCTGGAGACGGTTCCTGAGGCAGAAGAGAACAACCTTTTCGTTGGCAAAGGCATATGACGTGCTGGGGATCAATGAGAAATCTGTNAAGTCAATGCCATTTGAACAACTTGCTCTTCTGATTGAATCAGCTTCTACTCTTCAGACTGTGAAATCCTTACTTGACCGGTTTGAGAGCCGCCTCAGAGTGTATACAGAAGTTGCTCCTGCCAGTCACTTCTCTGGCTTGGATAACATTGATCACCTTCTTAAACGGGTTGCTTCCCCCAAGAAAAGGGCTACTCCCAAGAGTTNGGTGAGAAGAAGGGAGGCAAAGAAAGTAGATCCAGTCAGGGAGTCGAACAATAGCTTGGCTAGGTTATCAAGGTATCAAGTGAGAGTTGTTCTTTGTGCTTATATGATATTGGGTCATCCAGATGCAGTATTCAGTGGAATGGGAGAACGTGAGATTGCATTGACCAAGTCTGCTCAAGAATTTGTCCAAATGTTTGAGCTGTTGATAAAGATTATACTTGAGGGGCCAATACAGAGTTCTGATGAAGAGTCTGTCTCAGTTGTTATGAAGCGATGTACCTTCAGATTGCAGCTTGCTGCTTTTGATAAAGCATGGTGCTCATACTTGAATTGTTTCGTGGCCTGGAAGGTTAAGGATGCTCGATCATTGGAGGAAGATTTGGTTAGAGCAGCTTGCCAGCTTGAGGCCTCTATGATTCAAACTTGCAAGTTAACTCCAGAGGGGGATGGTAGCCAGCTTAGTCATGATATGAAAGCTGTTCAGCATCAGGTCACTGAAGATCAAAAACTCTTGAGAGAAAAGGTGCAGCACCTGAGTGGAGATGCTGGGGTTGAGCGTATGGAATGTGCACTATCTGAAACAAGATCTAGGTACTTTAGAGTAAAGGACAGCGGAAGCCCAATGGGGTTTCCAGTGACTCAATTTATGNCTCCGAGCCCAACTCCACTTTCTACTGCCGGGAGCTCAAGTGAAAGAAATATTTCAAATGAGAGTAATAAGACAAGGCGAGTAGTTCGCTCCCTTTTTAAGGAGAGCGATACTTCCCCTAGAGAGTCCAGCTTCTCTGCACCTAGAACCAGTTCAGATAGTCAGCTTGGTGTTTCGATGGTAGCAGAGAATGTGGTTCTTGTAAATGAATTCCTCCATGAGCATCACCGTAGTTTTGCTGATGGCTTTGATATCTCTGATCACATTCAAAACAGCATTGAGGGTAAAATAAAACAGACGATGGAAAAGGCCTTTTGGGATAATGTCATGGAATCTGTTAAGCAAGATCAGCCCAACTATGACCAGATTATTCAACTCATGNGAGAGGTTAGGGATGAAATCTGTGAGATGGCTCCAATAAGCTGGAAGGAAGATATTATTGCAGCCATTGATTTGGAAATTCTTTCTCAGGTGCTGAAATCGGGTAAACTGGATGTTGATTACCTTGGAAAAATTCTTGAGTTTTCAGTAGTCAGTTTGCAGAAGCTTTCAGCTCCAGCCAATGAGGAGATAATAAAGGCCAAGCACAAGACANTATTCTCTGAGTTGAATGAAATATGCCAATCTAGAGATGAATCAAACAATGCATGTGTTGTAGCCTTGGTAAAGGGTCTGCAGTTTGTTCTTGAACAGATTCAGATTCTTAAGAAAGAGATAAGCAAAGCACGCATTAGATTAATGGAGCCTTTGGTTAAGGGGCCTGCTGGTTTGGACTACCTCAGGAATGCCTTTGCAAACAAATATGGATCTCCATCTGATGCCAATACCTCTCTTCCTTTAACACTNAGATGGCTTTCATCTATTTGGAATTGTAAAGATCAGGAATGGGAAGAACATGTCAATTCCTCCTCAGCATTGGCTGATAATTCATCCCAAGAATGGCTTCCTTCAACTACTCTCAGAACTGGGGGAAATATTATGCTCAAAACTACTGGCAGTCCAATGGGCTTTTCTCCTGATGGTTCAAATACTAAAGGTAATCAGCAGCCAGAATGCAAAGGAGAACAAGTTGATCTAGTTGTGAGGCTTGGTTTGCTAAAATTAGTAAGTGGAATATCTGGTCTGACACCAGATGATCTGCCAGAAACTTTATCTCTTAACTTCTCCAGGCTGAGGTCTGTTCAGGCTCAAATTCAGAAGATTATTGTGATTTCTACGAGCATTCTTATATGCCGCCAGATTATTCTGAGTGAAAAGGCAGNAACAAGCCCTGCGGATATGGAAAATGCAGTGTCCAAATGTGCTGAACAACTTTCGGATCTCCTGGACCGTNTTGAAGATGCTAATATTGAAGATATTATAGAAGTGGTTTGCAATTTGNCCACGGATGATGGTGAAAATACAGGGAAGGTTCAGTCAAGAAAGGTAGTTGCTGCCAGGATGCTAGGAAAGAGCTTACANGCTGGGGATGCTGTGTTTGAGAGGGTGTTTAATGCTGTCTATTCAGCTTTGCGCGGAGTTGTGCTTGGGGGAAATGGGGNCCGTGGGAGGAAATTAGCAGAAATGGCTCTCCTGAAAGTTGGGGCTGGTGTTCTGACTGAAAGGGTAGTGGAAGCCGCTAGTGTTTTGATTGTGGTGGCCACCATATCAGTTAGTGTTCACGAGCCATGGTATAAATATTTGACTAGTAACATGTGAATAAAATTTGGTAAGGACATGAATAATACTACACTCAAAATTTGTACATAGGAGTGTGTAAAGTTGTCAGCTGTGTATCTTAGGTTTCTGTAGAGATAAGTGGTGATATGGTATTGTCTGAAGTAGAATTCTTTTAATGTAATGAATAACAATAACAATGTCTATATAGTACCTAAATTTAAGATTTAAATTGCTAATATATGATTGGTTTTAGAAGTTA

Protein Sequence

>Glyur000192s00009361.1
MAAGVELPXGRASGGGGVVMEFPVGEEESLSSPARLPKRLRRRLLDAECKSPSTVEEIEAKLRDADLRRQKYYEKLSSKARAKPRSPSRCSSQDEDLGQRLEAKLQAAEQKRLSILTKAQMRLARQDELRQAAKTGVEMRHASERVKLGTKVESRVQQAEANRMLILKAHRQRRASLRERSXQSLMRRMARESKYKECVRAAINQKRAAAETKRLGLLEAEKKKAHARVLQVTHKAKSVSHQREIERRKKKDELENRLQRAKRQRAEYLRHRGRMRDYAGENWIRMSKQAEYLSRKLARCWRRFLRQKRTTFSLAKAYDVLGINEKSVKSMPFEQLALLIESASTLQTVKSLLDRFESRLRVYTEVAPASHFSGLDNIDHLLKRVASPKKRATPKSXVRRREAKKVDPVRESNNSLARLSRYQVRVVLCAYMILGHPDAVFSGMGEREIALTKSAQEFVQMFELLIKIILEGPIQSSDEESVSVVMKRCTFRLQLAAFDKAWCSYLNCFVAWKVKDARSLEEDLVRAACQLEASMIQTCKLTPEGDGSQLSHDMKAVQHQVTEDQKLLREKVQHLSGDAGVERMECALSETRSRYFRVKDSGSPMGFPVTQFMXPSPTPLSTAGSSSERNISNESNKTRRVVRSLFKESDTSPRESSFSAPRTSSDSQLGVSMVAENVVLVNEFLHEHHRSFADGFDISDHIQNSIEGKIKQTMEKAFWDNVMESVKQDQPNYDQIIQLMXEVRDEICEMAPISWKEDIIAAIDLEILSQVLKSGKLDVDYLGKILEFSVVSLQKLSAPANEEIIKAKHKTXFSELNEICQSRDESNNACVVALVKGLQFVLEQIQILKKEISKARIRLMEPLVKGPAGLDYLRNAFANKYGSPSDANTSLPLTLRWLSSIWNCKDQEWEEHVNSSSALADNSSQEWLPSTTLRTGGNIMLKTTGSPMGFSPDGSNTKGNQQPECKGEQVDLVVRLGLLKLVSGISGLTPDDLPETLSLNFSRLRSVQAQIQKIIVISTSILICRQIILSEKAXTSPADMENAVSKCAEQLSDLLDRXEDANIEDIIEVVCNLXTDDGENTGKVQSRKVVAARMLGKSLXAGDAVFERVFNAVYSALRGVVLGGNGXRGRKLAEMALLKVGAGVLTERVVEAASVLIVVATISVSVHEPWYKYLTSNM

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00192	252725	259595	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000192s00009361.1	PF05794.8	Tcp11	684	1174	3.10E-90

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.136
SRR1783600	control	12.090
SRR1783602	moderate drought stress	22.518
SRR1811619	moderate drought stress	22.626

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	25.452
DRR006520	Root Summer glycyrrhizin high producing strain	25.373
DRR006521	Root Winter glycyrrhizin high producing strain	32.646
DRR006522	Root Winter glycyrrhizin high producing strain	31.817
DRR006523	Root Summer glycyrrhizin low producing strain	34.200
DRR006524	Root Summer glycyrrhizin low producing strain	33.978
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.356
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.106

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	55.249
SRR2868004	Drought Stress (root)	86.442
SRR2967015	Control (root)	81.527

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	118.461
SRR9715740	Leaf	101.148
SRR9715741	Leaf	152.819
SRR9715739	Root	8.428
SRR9715742	Root	60.282
SRR9715743	Root	52.992

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	52.498
SRR8749028	MeJA induced 9h	160.063
SRR8749029	MeJA induced 9h	86.414
SRR8749030	Uninduced	95.104
SRR8749031	Uninduced	178.451
SRR8749032	Uninduced	123.233

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	55.001
SRR8400027	Control - Root	44.073