Gene detail

Gene detail information of Glyur000192s00009355

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G11000.1	8.00E-66	Seven transmembrane MLO family protein
NR	XP_003592974.1	4.95E-95	MLO-like protein [Medicago truncatula]
Swissprot	tr\|O23693\|MLO4_ARATH	6.00E-78	MLO-like protein 4
trEMBL	tr\|I1KUP1\|I1KUP1_SOYBN	9.00E-96	MLO-like protein {ECO:0000256\|RuleBase:RU280816}

Sequence

Transcript Sequence

>Glyur000192s00009355.1
TCCGCTTCCTTTTGTTGTTTTTGGCAGAACTTACTACTTTTTTTTGTCGCTCACTATATATAAATTCCTCATGATGCCATATATACCGATTTTCCTTTGGGGCAACATAGGGGGGGACCCTTGCAACTTACCACTTGAAAATTGTTAACAACAACATTGGAGAGTNGGAAAAGCTCCATGTGCATGGTTTGGTTTGGAGATTTGGAGAGAGAGAAAGAGAGTGCGTGTGTCACAGCAGTAGCACCAATGCACATGCAGCACTTAACTTTGACAATAAAAAATACTAACAATAAACAATGAGTTTATAATGAAAGGTCAGTAGGATCTACACCTGCAATATCCACTGTCCACATGCACCCTTCACCATTCCCCTAATAAAAACAAAACACTCTCAAACTCTCTCTCAGCTCAGATGCTTCCTCCTTTCCTGGATCCCATCTGCCCCTCTTTTCTGTGGAATCAAAAGANTGTTTTTCTTTTTCTTCATGAAATGAAATGTTACAACTTTTTGCATTAGAGCTTAAAGGGCTGTGTTGAATGTTTATGTGAGAAATGGCGGAGGTTCTGCAACGAGGTCGCTCTCTGGCTGAGACGCCTACATATTCAGTTGCCTCGGTTGTCACTGTCATGGTCTTCGTCTGCTTCTTGGTTGAGCGTTCAATCTACCGCTTTGGAAAGGTAAAGACAACAAGACAGGGAAATTAACTGATTTGTCCAAGTGCTCTCACTTTATATTCTTGGACCCGCGTAGACCCTTCTCATGATTTGCCACCTGCTAGTTTAGTTTGCTATACTTGGCATGATAGTGTTGAAATTGCTTCTTATTTAGTATATATCTTAGGAACGTACAAAGATATGTAAGTGACATAAGCAGCTCTCAAGAAGCAATAATAACCACATGAACTGCTAAAAGTAAGTGATATGTTTTTCTATGCTCTCTTTCCATCCGCTGGTAAATTTATTACATGCTGTTGAGATCTTAGGTTAGTTTTTTTTTTATATTAATTAGGTACCAGTGTACCACGAGTTCTAGGTATCTAGGCAAATTTATCACCACATAACATGCCACCACTGCTCAGTGCCAATTAATTAGATTGTATGCATGGGGCATGGCGACTTACTAATTCTTTTATTTTTTATTTTTTAGGCTTTTTTTAGTTTATATCGATGTTGATCAACACAACTGGTTTCTTAAATCTCATGAAGACATGAAACTTATTTTTCTTGGCTGTGCAGTGGTTGAAGAAGACAAGAAGGAAGGCCCTCTTTGCTTCACTAGAGAAAATTAAGGAAGGTAAAACATGTTGTTCCTTAGCTCAGAAGCTAGCACAGGACACTGGGATGATTCCACNATGCCTTGTGTACTTGAATTGCTAATGCATTTCCCTGAATTTGAAGTGCGGTTGAGTTGGAATTGAGATACCATTAGACATCCTTCTATCACTTGGGTGTATGGTAGGAAGAAAGGAGTGAGTGGCAAGGGATTAGTAGCTATACATGCAGTGAGGGAAATGTGAGAGGGGGAAATCATGGGGATCCAAATTGTTCTGCTAGTGTGAGAGTTCTTGTGGTAAAGCCTGATCTAATACTGATATGATATCATATCATGTCTATATCAGTAGCAAAGAAGGCTTTCCAGTGTGAATGTTCAATAATTTACTAGCCTCATTCCGTTTTCCTATTAGAATCTTTGGCATATATACTGATTTTTTTTTTTTAATTTTTTTTGCTTTTAACTTGGATTGATCCTTCCTGATAGAGCTGATGCTGCTTGGACTTATCTCTTTGTTGTTGGCACAAAGCGCAAGGTGGATCTCTGAAATTTGTGTGAACTCATCACTTTTCAGCAGCCAATTTTATATTTGTGCTGAACAAGACCTTGTTGGCATGAATGAGAATGTCGCAATTGAAAACTCTTCCTCTTTCCCTGATGAAGCTACCATTCCAAAGGGACTAAATAGTGGTGTATTCCATCAATGTCCAGAGGGACATGAACCATTTGTTTCATATGAGGGTCTTGAGCAGCTGCACCGGTTCTTATTTGTTCTTGGGATCACTCATGTTCTGTATAGTTGTCTGGCTGTTGGTTTAGCGATGAGCAAGGTCAGTGATCAAAATTTCCAGTTTATTATAGGATTATGTATAACATTTCTCCTTAACACTTACAAATATGTTAAGCATTAACCATTGAGGTGCAACAACAATACAATAACATTCACAGTTATTATACCTAAAATCTGTCAATGTTCTTATAAGTAGTAATGACTAGATAAATAGTGTCTTTGCATGAGCATCCAATGCTCATGTAGGGAAGACATTGCCTCTTGTGGTTTAGTTTTTGTTTGTTGCATGTGTTTGTAGATCTATAGTTGGCGCAGATGGGAAAATCAGGCTACAATGGCAACCGATGGAAATTTGCAAGGTAAATAACAACATAGAATGGTGCTTCATCGACCAACCTTTGTCAATATAGAAACAAATGACTGAAGAGTAAAATTCTACAAACTTGGTTTCCACTGCTTGTTTCTGATGTAATAATTTCTGCATATACATACTTTTACTAATTTTGTTGTACAGGAAGGAAAAACAAGGTGATGAGGAGGCAGACAACCTTTGTTTTCCATCACACTTCTCATCCGTGGAGCAGGAGTCCAATACTAATCTGGATGCTCTGCTTTCTGCGTCAGTTTAGGAGTTCTATACAGAAATCAGATTACCTTGCACTCCGCCTGGGTTTCATCACTGTAAGTTTATCTGTTGAGGGTTTTAAATTTCTTCTGTCATCTCTAATTCATCTATACTGAAGGAAACTTCTATTTAATATGTTTACATAGTGGACTGACTGAGATATATATACTCTTCTATTCACAAAAAAGTCCNTGTCAATCGAGAATTTCGTGGTTAACAAGCAGTTTTTCTAGAATAAAATCATTAACTTGTTCTTCATCTTCCTCACTAATATATTCTATATATAATTATATATCACTGGTCTTATATGCTCCCCTGCATTGTAAATTTACAGGAGCATAAGTTGCCATTGTCATATGATTTTCATAAATATATGGTTCGAAGCATGGAAGATGAATTTCATGGCATTCTAGGCATAAGCTGGCCGCTTTGGATTTATGCCATAGTCTGCATCTTCGTGAACATCCATGGTAATCAGAAATTGAACCTGTGTACAAAACTTCAACATGTTGTATCCACTTTAGCACTTGAAATCAGGGAGCAGACAGGTCCATCTGCTAGGACACAAGTAAAGCCACGTGATGGTCTTTTCTGGTTCAAAAAACCAGATATACTGTTATGGCTGATACAGTTTGTGATATTTCAGAATGCCTTTGAAATGGCAACCTTTATTTGGACATTGTGGGGATTCAAAGAAAAATCATGCTTCATGAGAAACCATTACATGATCATCATCCGGTTGACATCTGGTGTTCTTGTTCAGTTTTGGTGTAGCTACATGACAGTGCCCCTGAATGTAATAGTTTCACAGGTTTGGCTTAAACTTTCTCTCTATTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00192	216394	223284	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006952 defense response

cellular_component
GO:0016021 integral component of membrane

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000192s00009355.1	PF03094.10	Mlo	11	169	4.30E-60
Glyur000192s00009355.2	PF03094.10	Mlo	7	178	8.70E-55
Glyur000192s00009355.2	PF03094.10	Mlo	203	233	1.80E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.276
SRR1783600	control	1.308
SRR1783602	moderate drought stress	0.473
SRR1811619	moderate drought stress	0.485

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.340
DRR006520	Root Summer glycyrrhizin high producing strain	1.277
DRR006521	Root Winter glycyrrhizin high producing strain	1.114
DRR006522	Root Winter glycyrrhizin high producing strain	1.162
DRR006523	Root Summer glycyrrhizin low producing strain	0.661
DRR006524	Root Summer glycyrrhizin low producing strain	0.669
DRR006525	Leaf Summer glycyrrhizin high producing strain	388.161
DRR006526	Leaf Summer glycyrrhizin high producing strain	407.650

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.261
SRR2868004	Drought Stress (root)	19.136
SRR2967015	Control (root)	10.266

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	394.290
SRR9715740	Leaf	429.037
SRR9715741	Leaf	233.657
SRR9715739	Root	0.553
SRR9715742	Root	1.076
SRR9715743	Root	0.902

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.205
SRR8749028	MeJA induced 9h	8.300
SRR8749029	MeJA induced 9h	9.929
SRR8749030	Uninduced	2.719
SRR8749031	Uninduced	2.354
SRR8749032	Uninduced	3.732

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	4.028
SRR8400027	Control - Root	3.816