Gene detail information of Glyur000192s00009353 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | EJK60586.1 | 7.77E-06 | hypothetical protein THAOC_19027, partial [Thalassiosira oceanica] |
| trEMBL | tr|K0SHU4|K0SHU4_THAOC | 3.00E-06 | Uncharacterized protein {ECO:0000313|EMBL:EJK60586.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00192 | 209350 | 210191 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.384 |
| SRR1783600 | control | 6.227 |
| SRR1783602 | moderate drought stress | 8.586 |
| SRR1811619 | moderate drought stress | 9.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.578 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.239 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.016 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.121 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.783 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.159 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.099 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.004 |
| SRR2967015 | Control (root) | 0.027 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.006 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.108 |
| SRR8749031 | Uninduced | 0.047 |
| SRR8749032 | Uninduced | 0.083 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.000 |
| SRR8400027 | Control - Root | 0.019 |