Gene detail

Gene detail information of Glyur000192s00009348.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G58110.2	7.00E-85	Basic-leucine zipper (bZIP) transcription factor family protein
NR	XP_003525005.1	0	PREDICTED: uncharacterized protein At4g06598 [Glycine max]
Swissprot	tr\|Q8W3M7\|Y4598_ARATH	2.00E-60	Uncharacterized protein At4g06598
trEMBL	tr\|K7KQP3\|K7KQP3_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA05G30170.5}

Sequence

Transcript Sequence

>Glyur000192s00009348.1
CTGCTTTGATTTTAAGCCCTTTTTTGCATTGCATTTCGGGATATCGAATCTTCAATCCCCAAAGGTATTGGTTCTNCTTCCATGGCAAATTTAAAGGGCTCACCAGGCATCAGAAATTTGATGTACTCTGGAAAGCATGCTCTGCTTCCTCCTAAAATCCCATTTCCTATTGTTTCCAATTTATATGCTGATCACATGCCAAAACCTACAAATGGTTCAAAGATTGCGCAGAAACCTAGTGAGGGAAACCCACACCACCATCGTACTTCATCTGAGAGCCTTGTTATGGATGAGCATCCTTCGTGGCTCGACGATCTCCTTAATGAGCCAGAGACACCTGTCCGTAAGGGTGGACATCGACGTTCATCAAGTGATTCTTTTGCATACGCAGACGTGGCTAATGTTTCTAACATCAGTTATGCAGACCAGGATGAATACAAATTTAGGAACTTGACATATATTCCATCTTGGTCATCTCATTCTCAAGACTTTGATCACGGCAAAGGTGCTCGTCAGATACTCTCGTGTGCAGAAATGAATTCCACAAAACTGAAAAATAGGGCATGGGACTCTTGTTTAAATTCTGTGACCCATCCAGGTGGTGTTCTCTCTGGCAAAGACAATGTTGCTTCTTGGAGTTCAGGATTGTCGTGTCCACCACATGAAGCAGATGGGGTTCCATCCACTGCAAATGAGAAACATGATTCAGTAGAATCTGGTGCACAGGATGCAAAATCATTTCCTGATAGAAAAGATGGTTCAAATGCAAATTCATCTGCTTCTGAAACAGATACAAAACGTACTAAACAGCAATTCGCTCAACGTTCACGGGTCCGTAAACTTCAATATATAGCTGAACTGGAAAGAAATGTACAAGGTTTACAGGCAGAAGGGTCTGGAGTATCAGCNGAGCTTGAATTTCTTAACCAGCAGAATTTAATCCTTAGTATGGAGAATAAAGCTCTCAAGCAACGCTTAGATAGCTTAGCACAAGAGCAGCTTATCAAATTTTTGGAGCAGGAAGTTCTGGAAAGAGAAATAGGAAGATTACGTGCACTGTACCAGCAGCAACTGCAGCAACCACCAGCTGTCCATCGACAAACAAATAGCGGGGACCTGGAAACCCAGTTTGCAAACCTTTCTTTGAAACAGGACACCAATTCAAGGCGTGATCCCGTGACGGGGGCACTTCGAATCTAGATTTGCAGGAGCTGTAGCTGTAGTTGTGTTTCTTCCTCTTGTTCAACTGTTTGTTGCCACACCTACAACAAAATTATTTCCTTCCCCGGTGCGGGATTGTGCAGAGATTTCCAGAATGTGCCCTCTCTGCCCCCCTTGCTCATTTCAATCTTGTATTAACCTTTTCCTTCTCTGTTTGTTTGAACTAGTAATATCAATTTCCAGTTTCCCACCCAATATGATTTAACGTGCACCTGGTGGTCAACCAAAATCCTATTCTGTTTTGGTTGGTTGACCTACCGGAGGTGGTAATTCAGCAGCTTCAAAGCT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00192	193543	196407	-

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

molecular_function

GO:0003700 transcription factor activity, sequence-specific DNA binding

GO:0043565 sequence-specific DNA binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000192s00009348.1	PF00170.16	bZIP_1	246	292	3.20E-05

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	11.648
SRR1783600	control	11.596
SRR1783602	moderate drought stress	14.351
SRR1811619	moderate drought stress	14.248

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	12.193
DRR006520	Root Summer glycyrrhizin high producing strain	12.238
DRR006521	Root Winter glycyrrhizin high producing strain	9.404
DRR006522	Root Winter glycyrrhizin high producing strain	9.143
DRR006523	Root Summer glycyrrhizin low producing strain	12.893
DRR006524	Root Summer glycyrrhizin low producing strain	13.770
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.388
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.145

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	14.506
SRR2868004	Drought Stress (root)	15.251
SRR2967015	Control (root)	16.751

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	11.058
SRR9715740	Leaf	10.235
SRR9715741	Leaf	11.405
SRR9715739	Root	1.657
SRR9715742	Root	5.062
SRR9715743	Root	5.134

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.886
SRR8749028	MeJA induced 9h	13.907
SRR8749029	MeJA induced 9h	9.889
SRR8749030	Uninduced	11.423
SRR8749031	Uninduced	11.362
SRR8749032	Uninduced	10.383

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	15.340
SRR8400027	Control - Root	13.094