Gene detail information of Glyur000192s00009327 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G80160.1 | 3.00E-50 | Lactoylglutathione lyase / glyoxalase I family protein |
| NR | XP_003592932.1 | 6.70E-102 | Metallothiol transferase fosB [Medicago truncatula] |
| COG | YP_004774436.1 | 9.00E-12 | glyoxalase/bleomycin resistance protein/dioxygenase [Cyclobacterium marinum DSM 745] |
| trEMBL | tr|G7IN97|G7IN97_MEDTR | 2.00E-102 | Lactoylglutathione lyase/glyoxalase I family protein {ECO:0000313|EMBL:AES63183.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00192 | 95800 | 104227 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000192s00009327.1 | PF12681.2 | Glyoxalase_2 | 27 | 138 | 1.70E-12 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.356 |
| SRR1783600 | control | 0.303 |
| SRR1783602 | moderate drought stress | 0.039 |
| SRR1811619 | moderate drought stress | 0.020 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.913 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.967 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.114 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.112 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.325 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.342 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.624 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.753 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.818 |
| SRR2868004 | Drought Stress (root) | 12.099 |
| SRR2967015 | Control (root) | 13.481 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 30.825 |
| SRR9715740 | Leaf | 2.728 |
| SRR9715741 | Leaf | 8.344 |
| SRR9715739 | Root | 0.348 |
| SRR9715742 | Root | 5.074 |
| SRR9715743 | Root | 5.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.763 |
| SRR8749028 | MeJA induced 9h | 0.309 |
| SRR8749029 | MeJA induced 9h | 0.314 |
| SRR8749030 | Uninduced | 0.197 |
| SRR8749031 | Uninduced | 0.316 |
| SRR8749032 | Uninduced | 0.088 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.677 |
| SRR8400027 | Control - Root | 3.283 |