Gene detail information of Glyur000192s00009318 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24310.1 | 1.00E-46 | Protein of unknown function (DUF679) |
| NR | XP_009596399.1 | 4.74E-82 | PREDICTED: uncharacterized protein LOC104092490 [Nicotiana tomentosiformis] |
| trEMBL | tr|M1CBN1|M1CBN1_SOLTU | 3.00E-79 | Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400064047} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00192 | 58807 | 59442 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000192s00009318.1 | PF05078.7 | DUF679 | 38 | 204 | 1.90E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.074 |
| SRR1783600 | control | 2.006 |
| SRR1783602 | moderate drought stress | 1.226 |
| SRR1811619 | moderate drought stress | 1.172 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.852 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.813 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.175 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.171 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.212 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.023 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.225 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.723 |
| SRR2868004 | Drought Stress (root) | 7.489 |
| SRR2967015 | Control (root) | 5.033 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.105 |
| SRR9715740 | Leaf | 0.399 |
| SRR9715741 | Leaf | 0.410 |
| SRR9715739 | Root | 1.676 |
| SRR9715742 | Root | 4.173 |
| SRR9715743 | Root | 3.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.202 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.471 |
| SRR8749030 | Uninduced | 0.066 |
| SRR8749031 | Uninduced | 0.183 |
| SRR8749032 | Uninduced | 0.179 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.167 |
| SRR8400027 | Control - Root | 8.710 |