Gene detail information of Glyur000192s00009309 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24280.1 | 0 | chloroplast heat shock protein 70-1 |
| NR | XP_003548186.1 | 0 | PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic-like [Glycine max] |
| COG | YP_007159288.1 | 0 | Chaperone protein dnaK [Anabaena cylindrica PCC 7122] |
| Swissprot | tr|Q02028|HSP7S_PEA | 0 | Stromal 70 kDa heat shock-related protein, chloroplastic (Precursor) |
| trEMBL | tr|I1MJU7|I1MJU7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA16G00410.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00192 | 18707 | 22321 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000192s00009309.1 | PF00012.15 | HSP70 | 186 | 592 | 3.30E-155 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 202.468 |
| SRR1783600 | control | 201.699 |
| SRR1783602 | moderate drought stress | 149.466 |
| SRR1811619 | moderate drought stress | 147.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 156.504 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 154.442 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 63.406 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 61.835 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 114.306 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 114.053 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 363.334 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 360.898 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 143.065 |
| SRR2868004 | Drought Stress (root) | 116.317 |
| SRR2967015 | Control (root) | 97.958 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 312.762 |
| SRR9715740 | Leaf | 355.256 |
| SRR9715741 | Leaf | 264.147 |
| SRR9715739 | Root | 123.394 |
| SRR9715742 | Root | 171.816 |
| SRR9715743 | Root | 150.864 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 136.568 |
| SRR8749028 | MeJA induced 9h | 133.245 |
| SRR8749029 | MeJA induced 9h | 78.307 |
| SRR8749030 | Uninduced | 64.167 |
| SRR8749031 | Uninduced | 28.393 |
| SRR8749032 | Uninduced | 58.891 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 206.159 |
| SRR8400027 | Control - Root | 191.746 |