Gene detail information of Glyur000192s00009307 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G52330.1 | 7.00E-20 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| NR | XP_004506854.1 | 4.15E-58 | PREDICTED: uncharacterized protein LOC101490196 isoform X2 [Cicer arietinum] |
| trEMBL | tr|V7AQW6|V7AQW6_PHAVU | 1.00E-57 | Uncharacterized protein {ECO:0000313|EMBL:ESW07685.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00192 | 5893 | 6836 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.336 |
| SRR1783600 | control | 16.971 |
| SRR1783602 | moderate drought stress | 15.493 |
| SRR1811619 | moderate drought stress | 15.112 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.429 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.609 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.423 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.612 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.325 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.324 |
| SRR2868004 | Drought Stress (root) | 1.851 |
| SRR2967015 | Control (root) | 1.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.058 |
| SRR9715740 | Leaf | 14.343 |
| SRR9715741 | Leaf | 6.719 |
| SRR9715739 | Root | 33.333 |
| SRR9715742 | Root | 10.348 |
| SRR9715743 | Root | 9.390 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.146 |
| SRR8749028 | MeJA induced 9h | 0.085 |
| SRR8749029 | MeJA induced 9h | 0.116 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.434 |
| SRR8400027 | Control - Root | 0.861 |