Gene detail information of Glyur000191s00015642.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G24630.1 | 3.00E-153 | DHHC-type zinc finger family protein |
| NR | XP_004496446.1 | 0 | PREDICTED: probable S-acyltransferase At4g24630-like [Cicer arietinum] |
| Swissprot | tr|Q9SB58|ZDH19_ARATH | 0 | Protein S-acyltransferase 8 |
| trEMBL | tr|G7IBW6|G7IBW6_MEDTR | 0 | S-acyltransferase {ECO:0000256|RuleBase:RU079119} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 241964 | 244661 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K16675 | ZDHHC9_14_18 | EC:2.3.1.225 | Hippo signaling pathway -fly | map04391 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015642.1 | PF01529.15 | zf-DHHC | 82 | 266 | 8.40E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.603 |
| SRR1783600 | control | 6.691 |
| SRR1783602 | moderate drought stress | 6.888 |
| SRR1811619 | moderate drought stress | 6.787 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.757 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.370 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.757 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.750 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.175 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.357 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.427 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 12.982 |
| SRR2868004 | Drought Stress (root) | 12.869 |
| SRR2967015 | Control (root) | 13.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.696 |
| SRR9715740 | Leaf | 3.920 |
| SRR9715741 | Leaf | 5.461 |
| SRR9715739 | Root | 5.174 |
| SRR9715742 | Root | 6.349 |
| SRR9715743 | Root | 5.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.403 |
| SRR8749028 | MeJA induced 9h | 15.691 |
| SRR8749029 | MeJA induced 9h | 17.909 |
| SRR8749030 | Uninduced | 10.476 |
| SRR8749031 | Uninduced | 13.271 |
| SRR8749032 | Uninduced | 17.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.453 |
| SRR8400027 | Control - Root | 11.913 |