Gene detail

Gene detail information of Glyur000191s00015641.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G76710.2	3.00E-144	SET domain group 26
NR	XP_007143566.1	0	hypothetical protein PHAVU_007G082400g [Phaseolus vulgaris]
COG	YP_001154790.1	2.00E-22	nuclear protein SET [Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1]
Swissprot	tr\|Q84WW6\|ASHH1_ARATH	2.00E-177	Histone-lysine N-methyltransferase ASHH1
trEMBL	tr\|V7BDB6\|V7BDB6_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW15560.1}

Sequence

Transcript Sequence

>Glyur000191s00015641.1
ATGGTTACAAAATTTCAGAAGTGTGAATATGCAAAAACAAAGTTGTTTAAAACTGAAGGCCGAGGGTGGGGTCTTTTGGCCGATGAGGACATTAAGGCAGGACAATTTGTCATTGAATACTGTGGAGAAGTAATATCATGGAAAGAAGCCAAACGTAGATCCCAGGATTATGAAATTCAAGGCCTTAAGGATGCATTTATTATTTGTCTTAATGCATCTGAATCTATTGATGCAACCAGAAAAGGAAGCCTTGCCAGATTTATAAATCATTCCTGTCAACCAAACTGTGAGACAAGAAAATGGAATGTCTTGGGGGAAATAAGAGTTGGAATATTTGCAAAGCATGATATTCCTATTGGAACTGAATTGGCATATGACTATAATTTTGAATGGTTTGGAGGCGCAAAGGTTCGCTGCCTCTGTGGTGCACTCAAATGTTCGGGATTCCTTGGAGCAAAATCTCGTGGTTTTCAGGAGGATACTTATCTATGGGAAGATGATGACGACAGGTACTCTGTTGAGAAAATCCCTGTGTATGACTCTGCAGAGGATGAACTGGGGTCAAATTTTAATGGAGGAACTGAACATTCCATGGATATTATACTTAAAGATGAGCAACTATCGGAGTCCACTACTTTTAATGTTCAGCCACTTGATTCAGTTCAGATGAAGGGTTTAGATGACAAGAAGATTAAAACTGATCTAGCAAGTGAGGACATGAAGTTGTACTCCCAAGATGCCGAACAGGCCCTTTCACAGAAGAACGCGATGATATCACGTATTCGAAGTAATACTGCAGGCAGAAACTATCGCATTGGACCCAGGTCCATGCCTAACAAAAGATCAAAGGCATATAATGGTGGAAGGTTTAAAAATCTCATACAGAATAAAATTGATGCAAAGTTTGCAGCTGGCCTCTTAGCATCAANGGAAGCACAGGAGGAGATCTTAGATCATGAGAAATGGAAAAATGACGCTACAGCTGCTCTTGATTCTTTATACAACGAAATACGGCCTGCCATTGAAGAACATGAGAGGGATAGCCAAGACAGTGTATCTACGACGGTAGCAGAGAAGTGGATCCAGGCTTGCTGCCTAAAACTGAAGGCGGAATTTGACCTTTACTCGTCAATTGTCAAAAATGTTGCCTGTACCCCTCAAAGGGCACCTGGCCAAGCCAAGCCTACAGAAGTAGATAACGAAAATGAAATTAAGCTTTTGACAGATTGAAATTCTTATCACATGTTTTTCCCCATCTATAATCTGTAATTCATGATT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00191	228356	231461	-

Gene family

Gene family	subfamily
Transcription Factors Family	SET

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0005515 protein binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000191s00015641.1	PF00856.23	SET	22	128	3.40E-25

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	12.506
SRR1783600	control	12.469
SRR1783602	moderate drought stress	19.573
SRR1811619	moderate drought stress	19.285

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	24.309
DRR006520	Root Summer glycyrrhizin high producing strain	24.205
DRR006521	Root Winter glycyrrhizin high producing strain	49.817
DRR006522	Root Winter glycyrrhizin high producing strain	47.571
DRR006523	Root Summer glycyrrhizin low producing strain	27.098
DRR006524	Root Summer glycyrrhizin low producing strain	27.185
DRR006525	Leaf Summer glycyrrhizin high producing strain	21.300
DRR006526	Leaf Summer glycyrrhizin high producing strain	21.267

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	33.156
SRR2868004	Drought Stress (root)	39.599
SRR2967015	Control (root)	43.792

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	21.861
SRR9715740	Leaf	24.721
SRR9715741	Leaf	26.343
SRR9715739	Root	0.754
SRR9715742	Root	10.033
SRR9715743	Root	7.191

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	47.082
SRR8749028	MeJA induced 9h	47.571
SRR8749029	MeJA induced 9h	43.844
SRR8749030	Uninduced	63.709
SRR8749031	Uninduced	41.626
SRR8749032	Uninduced	55.602

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	33.337
SRR8400027	Control - Root	32.550