Gene detail

Gene detail information of Glyur000191s00015640

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G71695.1	1.00E-101	Peroxidase superfamily protein
NR	XP_007143568.1	0	hypothetical protein PHAVU_007G082600g [Phaseolus vulgaris]
Swissprot	tr\|Q96520\|PER12_ARATH	5.00E-126	Peroxidase 12 (Precursor)
trEMBL	tr\|V7BCG4\|V7BCG4_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW15562.1}

Sequence

Transcript Sequence

>Glyur000191s00015640.1
AAGTCACTACTCAACCAAAAGAAGAGATGGGTAGAGGTGGTAGTGACAGTAGTACTCCTCTGTACTACTACTCTTTGCTCTTGATATCTTCAATATTGCTTTTTGCTAATTGTGAGGCACTGGCTGCAAAGCCTCCAATTGTGGATGGACTGTCATGGAATTTTTATCAGTTGAGCTGTCCCAGACTTGAAAATATAGTGAGAAAGCATCTCCAGAAGGTGTTCAAGCAGGACAGTGGCCAAGCCCCTGGTTTACTCAGGATCTTCTTCCATGACTGTTTCGTTCAGGGTTGTGATGGGTCGATATTGTTGGATGGAAGTCCAAGTGAAAGGGATCAGCCAGCAAACATTGGAATAAGAACAGAGGNGTTGCAGACCATTGAACAACTTCGATCTCTTGTCCACAAGCAGTGTGGAAGGGTTGTTTCCTGCGCTGACCTCGTTGTTCTGGCTGCACGAGAGGCTGTTTCCCAATCAGGAGGCCCTAAATTTGACGTGCCACTGGGAAGAAAAGATGGCGTAACCTTTAGCATAAACGGAACAAGGAATCTGCCACCACCATTCTTCAAAACCGGTGAGCTCCTCACCACTTTTGCCGCCAGAAACTTCGACGCCACAGATGTGGTGGCACTATCCGGTGCGCACACCTTCGGGAGAGCCCACTGTGGATCCTTCTTTGACAGGATCAACCAATCAGACCCACCCATTGAGGAGACCTTCGCCAACAATCTCAGGGCCACGTGTCCCACTAAAGACTCCACCAACACCACCGTGCTGGACGTTAGAACCCCCAATGTGTTCGATAATGTGTATTACGTCGACCTTCTGAACCGCCAGGGACTGTTTGTGTCGGACCAGGATCTGTTCAGTGATTCTAGGACAAAGGATGTGGTTCAATCCTTTGCTTCCGACCAGAAACTGTTCTTTGACAGGTTTGTTAGTGCTGTTGTCAAGTTGAGCCAGTTGGATGTGTTGACCGGAGAACAGGGACAGGTGCGTGCCAAATGCTCCCTCCCAAACACCAAGGAGAAGTCTCCGGTATCCTCTGTGGTGGAAGAGGTTGTGGATTTAACTAGTGACGTGTAAAACAGAACCGTAGATTAACGAGTTCCAGTGTATTTTCGTTTTGCGGATACCCACTATCCTTTCTGATCAGGACGATGTAATAATTAATAATAAATTATGACTATCTCA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00191	212979	216176	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000191s00015640.1	PF00141.18	peroxidase	58	295	7.00E-69

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	32.374
SRR1783600	control	32.616
SRR1783602	moderate drought stress	36.252
SRR1811619	moderate drought stress	36.789

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	46.219
DRR006520	Root Summer glycyrrhizin high producing strain	45.710
DRR006521	Root Winter glycyrrhizin high producing strain	28.758
DRR006522	Root Winter glycyrrhizin high producing strain	27.375
DRR006523	Root Summer glycyrrhizin low producing strain	53.098
DRR006524	Root Summer glycyrrhizin low producing strain	53.017
DRR006525	Leaf Summer glycyrrhizin high producing strain	24.938
DRR006526	Leaf Summer glycyrrhizin high producing strain	24.987

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	181.969
SRR2868004	Drought Stress (root)	184.159
SRR2967015	Control (root)	173.888

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	45.144
SRR9715740	Leaf	13.226
SRR9715741	Leaf	21.163
SRR9715739	Root	19.606
SRR9715742	Root	154.919
SRR9715743	Root	135.259

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.894
SRR8749028	MeJA induced 9h	0.525
SRR8749029	MeJA induced 9h	0.929
SRR8749030	Uninduced	0.117
SRR8749031	Uninduced	0.064
SRR8749032	Uninduced	0.232

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	57.425
SRR8400027	Control - Root	61.399