Gene detail

Gene detail information of Glyur000191s00015637.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G71695.1	4.00E-103	Peroxidase superfamily protein
NR	XP_004496443.1	7.03E-173	PREDICTED: peroxidase 12-like [Cicer arietinum]
Swissprot	tr\|Q96520\|PER12_ARATH	6.00E-125	Peroxidase 12 (Precursor)
trEMBL	tr\|Q43854\|Q43854_PHAAN	2.00E-166	Peroxidase {ECO:0000313\|EMBL:BAA01950.1} (Precursor)

Sequence

Transcript Sequence

>Glyur000191s00015637.1
ATGCAGGGTTGTGATGGTTCAGTTTTGTTGGATGGATCAGCAAGTGGGCCAAGTGAGAAAGATGCACCCCCAAACTTGACTTTGAGGCCCGAGGCCTTTAAGATCATCGAAGACCTTCGTAGTCGTGTACAAAAGAAGTGTGGAAGAGTCGTTTCCTGTTCTGACATCACTGCCCTTGCCGCACGTGATGCTGTTTTCCTTTCAGGAGGACCAGATTACGAAATTCCCCTGGGAAGGAGAGATGGATTAACCTTTGCCACAAGGAATGTGACATTGGCCAACCTTCCAGCACCTTCAAGCAACACCACAACAATCCTAAACTCTCTTGCCACCAAGAACCTTGACCCAACCGATGTGGTAGCCCTCTCAGGGGGACACACCATAGGAATCAGCCACTGCAGCTCTTTCACCAACAGGCTCTACCCAACCCAAGACCCTGTAATGGACAAGACCTTCGGGAACAACCTTAAGGTCACTTGCCCCACCAACAACACAGACAACACCACGGTGCTAGACATTCGAAGCCCCAACAAGTTCGATAACAAGTACTATGTTGACCTCATGAACCGCCAGGGACTATTTACCTCTGACCAAGATTTGTACACCGATAAGAGGACCAAAGACATCGTGACCAATTTTGCTGTGAACCAAACCCTGTTCTTTGAGAAATTCGTCACTGCTATGCTCAAAATGGGTCAACTCAATGTGTTGACTGGAACTCAAGGAGAGATTCGTGCCAATTGCTCTGCTAGAAATGTAGACAAGAAATCCTTCTTGACTACGGTGGTGGAAGATGTGTCAGGAGGACCAGATTACGAAATTCCCCTGGGAAGGAGAGATGGATTAACCTTTGCCACAAGGAATGTGACATTGGCCAACCTTCCAGCACCTTCAAGCAACACCACAACAATCCTAAACTCTCTTGCCACCAAGAACCTTGACCCAACCGATGTGGTAGCCCTCTCAGGGGGACACACCATAGGAATCAGCCACTGCAGCTCTTTCACCAACAGGCTCTACCCAACCCAAGACCCTGTAATGGACAAGACCTTCGGGAACAACCTTAAGGTCACTTGCCCCACCAACAACACAGACAACACCACGGTGCTAGACATTCGAAGCCCCAACAAGTTCGATAACAAGTACTATGTTGACCTCATGAACCGCCAGGGACTATTTACCTCTGACCAAGATTTGTACACCGATAAGAGGACCAAAGACATCGTGACCAATTTTGCTGTGAACCAAACCCTGTTCTTTGAGAAATTCGTCACTGCTATGCTCAAAATGGGTCAACTCAATGTGTTGACTGGAACTCAAGGAGAGATTCGTGCCAATTGCTCTGCTAGAAATGTAGACAAGAAATCCTTCTTGACTACGGTGGTGGAAGATGTGGTGGAAGGGTTGATAGGCATGAACATTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00191	183721	187680	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00430	E1.11.1.7	EC:1.11.1.7	Phenylpropanoid biosynthesis	map00940

Gene Ontology

biological_process

GO:0006979 response to oxidative stress

GO:0055114 oxidation-reduction process

molecular_function

GO:0004601 peroxidase activity

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000191s00015637.1	PF00141.18	peroxidase	2	215	3.00E-60
Glyur000191s00015637.1	PF00141.18	peroxidase	266	414	3.00E-38

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	9.676
SRR1783600	control	10.066
SRR1783602	moderate drought stress	10.027
SRR1811619	moderate drought stress	10.296

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	1.279
DRR006520	Root Summer glycyrrhizin high producing strain	1.325
DRR006521	Root Winter glycyrrhizin high producing strain	0.312
DRR006522	Root Winter glycyrrhizin high producing strain	0.305
DRR006523	Root Summer glycyrrhizin low producing strain	0.816
DRR006524	Root Summer glycyrrhizin low producing strain	0.931
DRR006525	Leaf Summer glycyrrhizin high producing strain	14.260
DRR006526	Leaf Summer glycyrrhizin high producing strain	14.457

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	13.355
SRR2868004	Drought Stress (root)	13.321
SRR2967015	Control (root)	14.508

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	326.308
SRR9715740	Leaf	153.528
SRR9715741	Leaf	343.861
SRR9715739	Root	22.506
SRR9715742	Root	36.646
SRR9715743	Root	31.991

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.898
SRR8749028	MeJA induced 9h	0.212
SRR8749029	MeJA induced 9h	0.258
SRR8749030	Uninduced	2.104
SRR8749031	Uninduced	6.056
SRR8749032	Uninduced	1.440

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	20.729
SRR8400027	Control - Root	15.139