Gene detail information of Glyur000191s00015635 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G09890.1 | 2.00E-20 | Protein of unknown function (DUF3511) |
| NR | XP_004496440.1 | 2.98E-49 | PREDICTED: uncharacterized protein LOC101513366 isoform X1 [Cicer arietinum] |
| trEMBL | tr|G7IBW0|G7IBW0_MEDTR | 2.00E-49 | Uncharacterized protein {ECO:0000313|EMBL:AFK44497.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 169516 | 169776 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015635.1 | PF12023.3 | DUF3511 | 40 | 85 | 5.90E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.656 |
| SRR1783600 | control | 19.452 |
| SRR1783602 | moderate drought stress | 31.441 |
| SRR1811619 | moderate drought stress | 32.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 79.145 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 79.250 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.283 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.408 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 74.760 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 49.941 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.593 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.600 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 76.238 |
| SRR2868004 | Drought Stress (root) | 118.216 |
| SRR2967015 | Control (root) | 108.721 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 14.805 |
| SRR9715740 | Leaf | 18.401 |
| SRR9715741 | Leaf | 19.205 |
| SRR9715739 | Root | 1.595 |
| SRR9715742 | Root | 10.626 |
| SRR9715743 | Root | 10.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.425 |
| SRR8749028 | MeJA induced 9h | 2.227 |
| SRR8749029 | MeJA induced 9h | 1.354 |
| SRR8749030 | Uninduced | 1.054 |
| SRR8749031 | Uninduced | 0.258 |
| SRR8749032 | Uninduced | 0.023 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.724 |
| SRR8400027 | Control - Root | 29.995 |