Gene detail information of Glyur000191s00015631 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G26180.1 | 2.00E-99 | IQ-domain 6 |
| NR | XP_004501461.1 | 0 | PREDICTED: protein IQ-DOMAIN 1-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|Q9SF32|IQD1_ARATH | 4.00E-27 | Protein IQ-DOMAIN 1 |
| trEMBL | tr|V7AW43|V7AW43_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW08833.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 147268 | 150008 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.415 |
| SRR1783600 | control | 2.537 |
| SRR1783602 | moderate drought stress | 1.473 |
| SRR1811619 | moderate drought stress | 1.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.505 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.395 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.067 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.065 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.592 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.485 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.390 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.446 |
| SRR2868004 | Drought Stress (root) | 6.627 |
| SRR2967015 | Control (root) | 7.997 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.540 |
| SRR9715740 | Leaf | 1.437 |
| SRR9715741 | Leaf | 0.909 |
| SRR9715739 | Root | 0.622 |
| SRR9715742 | Root | 1.260 |
| SRR9715743 | Root | 0.965 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.529 |
| SRR8749028 | MeJA induced 9h | 4.728 |
| SRR8749029 | MeJA induced 9h | 5.918 |
| SRR8749030 | Uninduced | 0.446 |
| SRR8749031 | Uninduced | 0.363 |
| SRR8749032 | Uninduced | 0.665 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.315 |
| SRR8400027 | Control - Root | 8.034 |