Gene detail information of Glyur000191s00015628 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G33040.1 | 2.00E-32 | Thioredoxin superfamily protein |
| NR | XP_004501464.1 | 3.84E-59 | PREDICTED: glutaredoxin-C6-like [Cicer arietinum] |
| Swissprot | tr|Q8L9S3|GRXC6_ARATH | 9.00E-50 | Glutaredoxin-C6 |
| trEMBL | tr|K7KI77|K7KI77_SOYBN | 4.00E-56 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G05490.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 130357 | 130764 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015628.1 | PF00462.19 | Glutaredoxin | 51 | 86 | 3.40E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 108.173 |
| SRR1783600 | control | 108.283 |
| SRR1783602 | moderate drought stress | 78.021 |
| SRR1811619 | moderate drought stress | 77.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 134.597 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 140.419 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 33.932 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 29.858 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 102.128 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 105.467 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.973 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 69.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 114.707 |
| SRR2868004 | Drought Stress (root) | 111.906 |
| SRR2967015 | Control (root) | 121.362 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 18.130 |
| SRR9715740 | Leaf | 22.697 |
| SRR9715741 | Leaf | 19.248 |
| SRR9715739 | Root | 111.703 |
| SRR9715742 | Root | 45.232 |
| SRR9715743 | Root | 56.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 35.356 |
| SRR8749028 | MeJA induced 9h | 30.727 |
| SRR8749029 | MeJA induced 9h | 43.392 |
| SRR8749030 | Uninduced | 13.150 |
| SRR8749031 | Uninduced | 5.406 |
| SRR8749032 | Uninduced | 12.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 165.933 |
| SRR8400027 | Control - Root | 140.124 |