Gene detail

Gene detail information of Glyur000191s00015627

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G56450.1	2.00E-137	Mitochondrial substrate carrier family protein
NR	XP_004501465.1	0	PREDICTED: probable ADP,ATP carrier protein At5g56450-like [Cicer arietinum]
Swissprot	tr\|Q9FM86\|ADT5_ARATH	0	Probable ADP,ATP carrier protein At5g56450
trEMBL	tr\|V7AU34\|V7AU34_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW08825.1}

Sequence

Transcript Sequence

>Glyur000191s00015627.1
ATTACTGATTAGAAATTTTGATTCAGCTTCTAGTGGTGGATAAGTAGATAAGAGGATTAATGTAACACGTGGATGAATCCAGAGAGAGTAGGGGANAGGAGGGGAGGAGGTAACAACAGCATGCAAAACAAAACTATCTTTATCCGTAGAAGAAAGTCAAATGGAATGACCAACGAATTTCTTCTGCTTCGTCAGCCATAGCATACCATTCCACGTTTGGAAAATCAAGCAAGTTTCATGATCCCGTGTTTTCCCTCACTCTCAGAAACATTTACACGCCTTTTTTGAGGTTAATAATTACGTATGGAATGTGATTTCAGGATTTACATAAAGGGATAAGCTTGCTCGAAATTAATCTGGATTAGGTTTTTTTTTAAGAGAAAAAAAAAACAACGATGGGTGTGTTCCCTTTTGAGCAAAGTTTGTGAATTTGGAGAGAAAAAAGAAAAAGAGGCGCCACCGCCACGAAGGATGAGCGGTGAGGACGATGACCCAGAAAAAAGGAGGTTGAAATTGAGACAAGAACAAGAAGAAGCGTTGAATTTGAAGCGGTATTCTCGGCTGAGCAACTTCCACCGCGACCTGGTGGCAGGGGCGGTGATGGGTGGGGTGGTGCACACCATTGTGGCCCCAATTGAGAGGGCCAAGCTCTTGTTACAGACACAGGAAAGCAACTTGGCTATTGTTGCCAGTGGCCGTCGGAAATTCAAAGGCATGTTGGATTGCATAGCCCGTACTGTCAGGGAAGAAGGNATTCTCTCTCTCTGGCGTGGCAATGGTAGCAGTGTTCTTCGCTATTACCCTTCCGTCGCTCTCAATTTCTCTCTCAAGGATCTTTACAAAAGCATGTTAAGAAATGGGAACTCTCATGACGATAATCTTTTCTCTGGTGCATCCGCCAATTTTGTTGCTGGGGCTGCAGCAGGTTGTACAACACTTATCTTGGTATACCCCCTTGATATCGCACACACCCGCCTTGCTGCTGATATCGGGAGGACAGAAGTGCGTCAATTTCGAGGCATCTACCATTTCTTGGCCACCATATTCCACAAGGACGGGGTTCGGGGGATTTACAGGGGCCTTCCTGCATCTCTACATGGGATGGTATTACACAGGGGCCTTTACTTTGGAGGCTTTGATACTATGAAAGAGATTTTGTCTAAAGAGTCAAAACCCGAGTTGGCATTGTGGAAGCGTTGGGTGGTGGCTCAAGCAGTCACAACGTCTGCTGGTTTGATATCTTATCCGTTAGACACGGTTCGTAGGAGGATGATGATGCAGTCCGGCATGGAGCAGCCGGTGTACAATAGCACCCTGGACTGCTGGAGGAAGATCTATAGGACAGAGGGGTTGTCTTCATTTTACCGAGGAGCAGTTTCAAATGTGTTTAGGAGCACAGGTGCTGCAGCTATCTTAGTCTTGTATGACGAGGTTAAGAAGTTCATGAACTGGGGGAGATTGTAACACCACTCACCAGCACCATCTTACCTACATTCATTGATTTTGTTTTGATACCGGGGAGTGGGGACTTCATTACAACAACCTGTTATACATTTTGAGGCTTAGGATAATTTTGTAAAGTACGAATGAGCTCCATTCTAGTTCATTTGTCTTTAGTGGAATTCCAATGCAAAGGTGGCAGAGTTACCGATGCTAAGCAAAAATTGTGAAAAAGACAAGAAGTCAAGAATTGGTGGAATGAAGAAACATAATAGTAAGTGGCACGTAACAAGGATTGCTGATGGAGTCTTATTATTATTATTTTTTTCTGGGGTACCAATTTTTAAGGTGAAATTTTAGTTACCATTGCTTGTTAATTAGATTTAATATTTAATAACTTTATAAATAATTATGGTAAAANCAGCAGCTAACAGTAACAGTTGCTGACCTCAGATATAGTACCTTTAGGGCTCATGTTCATGTCCACCATC

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00191	121821	125698	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process

GO:0006810 transport

GO:0055085 transmembrane transport

cellular_component
GO:0005743 mitochondrial inner membrane

molecular_function
GO:0005215 transporter activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000191s00015627.1	PF00153.22	Mito_carr	33	129	3.00E-21
Glyur000191s00015627.1	PF00153.22	Mito_carr	141	232	7.80E-20
Glyur000191s00015627.1	PF00153.22	Mito_carr	238	326	2.20E-18

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	2.182
SRR1783600	control	2.261
SRR1783602	moderate drought stress	2.016
SRR1811619	moderate drought stress	1.978

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.023
DRR006520	Root Summer glycyrrhizin high producing strain	8.120
DRR006521	Root Winter glycyrrhizin high producing strain	6.301
DRR006522	Root Winter glycyrrhizin high producing strain	6.190
DRR006523	Root Summer glycyrrhizin low producing strain	11.518
DRR006524	Root Summer glycyrrhizin low producing strain	11.545
DRR006525	Leaf Summer glycyrrhizin high producing strain	6.141
DRR006526	Leaf Summer glycyrrhizin high producing strain	6.179

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	5.335
SRR2868004	Drought Stress (root)	6.206
SRR2967015	Control (root)	7.046

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	20.905
SRR9715740	Leaf	28.346
SRR9715741	Leaf	26.522
SRR9715739	Root	3.612
SRR9715742	Root	10.068
SRR9715743	Root	9.879

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	12.140
SRR8749028	MeJA induced 9h	29.823
SRR8749029	MeJA induced 9h	23.642
SRR8749030	Uninduced	23.377
SRR8749031	Uninduced	55.086
SRR8749032	Uninduced	20.734

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	5.419
SRR8400027	Control - Root	5.905