Gene detail information of Glyur000191s00015617 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G11790.1 | 2.00E-148 | N-MYC downregulated-like 2 |
| NR | NP_001240866.1 | 0 | uncharacterized protein LOC100804729 [Glycine max] |
| COG | YP_005369918.1 | 2.00E-06 | 3-oxoadipate enol-lactonase [Corallococcus coralloides DSM 2259] |
| Swissprot | tr|O23969|SF21_HELAN | 3.00E-160 | Pollen-specific protein SF21 |
| trEMBL | tr|C6T7K8|C6T7K8_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G05420.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 67673 | 71903 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015617.1 | PF03096.9 | Ndr | 18 | 302 | 8.90E-107 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.797 |
| SRR1783600 | control | 8.969 |
| SRR1783602 | moderate drought stress | 8.331 |
| SRR1811619 | moderate drought stress | 8.260 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.895 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.395 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.290 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.695 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.477 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.361 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.875 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.845 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 15.699 |
| SRR2868004 | Drought Stress (root) | 14.558 |
| SRR2967015 | Control (root) | 17.332 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.283 |
| SRR9715740 | Leaf | 5.875 |
| SRR9715741 | Leaf | 9.544 |
| SRR9715739 | Root | 8.266 |
| SRR9715742 | Root | 21.101 |
| SRR9715743 | Root | 20.492 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.549 |
| SRR8749028 | MeJA induced 9h | 7.372 |
| SRR8749029 | MeJA induced 9h | 11.764 |
| SRR8749030 | Uninduced | 4.461 |
| SRR8749031 | Uninduced | 1.386 |
| SRR8749032 | Uninduced | 5.530 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 37.958 |
| SRR8400027 | Control - Root | 56.641 |