Gene detail information of Glyur000191s00015614.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G26030.2 | 3.00E-155 | ferrochelatase 1 |
| NR | KHN29732.1 | 0 | Ferrochelatase-2, chloroplastic [Glycine soja] |
| COG | YP_007167757.1 | 7.00E-131 | ferrochelatase [Halothece sp. PCC 7418] |
| Swissprot | tr|P42044|HEMH_CUCSA | 0 | Ferrochelatase-2, chloroplastic (Precursor) |
| trEMBL | tr|I1JTV8|I1JTV8_SOYBN | 0 | Ferrochelatase {ECO:0000256|RuleBase:RU000607} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00191 | 45233 | 48908 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K01772 | hemH, FECH | EC:4.99.1.1 4.99.1.9 | Porphyrin and chlorophyll metabolism | map00860 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000191s00015614.1 | PF00762.14 | Ferrochelatase | 108 | 415 | 5.50E-94 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 26.509 |
| SRR1783600 | control | 26.462 |
| SRR1783602 | moderate drought stress | 19.446 |
| SRR1811619 | moderate drought stress | 18.899 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 49.680 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 49.411 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.139 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.763 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 79.019 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 79.299 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 36.200 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 36.875 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 49.405 |
| SRR2868004 | Drought Stress (root) | 59.975 |
| SRR2967015 | Control (root) | 48.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 144.903 |
| SRR9715740 | Leaf | 89.482 |
| SRR9715741 | Leaf | 172.170 |
| SRR9715739 | Root | 40.863 |
| SRR9715742 | Root | 89.841 |
| SRR9715743 | Root | 79.006 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 87.805 |
| SRR8749028 | MeJA induced 9h | 81.675 |
| SRR8749029 | MeJA induced 9h | 69.172 |
| SRR8749030 | Uninduced | 192.153 |
| SRR8749031 | Uninduced | 107.785 |
| SRR8749032 | Uninduced | 94.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 44.023 |
| SRR8400027 | Control - Root | 62.605 |