Gene detail information of Glyur000190s00015742 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01700.2 | 1.00E-91 | Protein phosphatase 2C family protein |
| NR | XP_003533680.1 | 0 | PREDICTED: probable protein phosphatase 2C 73-like [Glycine max] |
| Swissprot | tr|Q6NKS1|P2C65_ARATH | 5.00E-111 | Probable protein phosphatase 2C 65 |
| trEMBL | tr|I1L765|I1L765_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G41720.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00190 | 254777 | 258170 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000190s00015742.1 | PF00481.16 | PP2C | 186 | 298 | 1.00E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.208 |
| SRR1783600 | control | 4.329 |
| SRR1783602 | moderate drought stress | 2.926 |
| SRR1811619 | moderate drought stress | 2.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.612 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.537 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.569 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.589 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.561 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.765 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.177 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.171 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.023 |
| SRR2868004 | Drought Stress (root) | 5.480 |
| SRR2967015 | Control (root) | 3.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.715 |
| SRR9715740 | Leaf | 2.602 |
| SRR9715741 | Leaf | 3.194 |
| SRR9715739 | Root | 2.596 |
| SRR9715742 | Root | 2.638 |
| SRR9715743 | Root | 3.830 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.515 |
| SRR8749028 | MeJA induced 9h | 0.332 |
| SRR8749029 | MeJA induced 9h | 0.097 |
| SRR8749030 | Uninduced | 1.949 |
| SRR8749031 | Uninduced | 0.437 |
| SRR8749032 | Uninduced | 0.326 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.236 |
| SRR8400027 | Control - Root | 3.694 |