Gene detail

Gene detail information of Glyur000190s00015741

Functional Annotation

Database	Orthologs	Annotation
TAIR	AT5G01710.1	methyltransferases
NR	XP_004492512.1	PREDICTED: uncharacterized protein LOC101509260 [Cicer arietinum]
trEMBL	tr\|V7B2Z1\|V7B2Z1_PHAVU	Uncharacterized protein {ECO:0000313\|EMBL:ESW12179.1}

Sequence

Transcript Sequence

>Glyur000190s00015741.1
ATGGAACCTACCGCAGGGAAGCCTGGCTTCCTGCGGAACCTTCTGATACGGTTGCTTCTCTCCGGCGTTTTCATCATCGGCGTTCGTTTCGCNTACGTCATCTCCATCGCCGGCGAGTCCTGCAACGTCGGCGATTTCTGCTTCTTCGCCCTGCCGAAGACTCTCAGCATCGTCATCGCCGGTACCGGTCCCCTCGCCGTCGAGTCTTCTTCCGGCGGCGGTCGGGGCGATTCGTCGCTGGAGGAGCTCTACACTAGCAAGGACTGGATCAACGGTGTTCGGTTCTACTCGTCGGTGTTCCAGGACCTTATCTCCGGCGGTTACCTCTCGTCGGAGTCGAAGTCGCTGTGCGTGGAGACGCCGACCGGTCGCGACGTCTTCGCGCTGAGGGAGATCGGCGTCCGAGACGCCGTCGGAATCTCGAAGAAGGCGGCGAAGCCGCTCGTGAAGTCCGGCACCGGNGACCGGATACCGTTCGGCGACGGCGTCTTCGATTTCGTGTTCTCCGGCGAGGGATCCTTCGCGAGGTCGGCGAAGCCGGCNGTATTCGCGGCGGAGATCAGCCGGACGCTGAAACCGGGAGGGTTCGCGGTGTTCCATTTCACAAAACCCAAAGATACGTATAGTTTCAATTCGTTCCTTGATTTGTTCAACAATTGTTTCAGAGTAGTGAAGTTGCATGTCTTGGAAGGGTTTGATTCTTCAATGCCTTATATACATGAAACTGTTTTGAAAAAAGAGTGTGTTGATGATGGTGCTGGTAAATTTGATGGCCATTTTCCAAATGGGAAGTGTTATGTTCCTGAGTATAAGAAAGAGTTGGTTAGGAATGCTGAGCCTTTGATTGAAAAGGAGCCACTGAAGCCATGGATTACATTGAAAAGGAATATAATGAACATAAAGTACCTTCCTTCAATGGTTGATATAAGCTTTAAGAATAGGTATTTGTATGTTGATGTTGGAGCTAGAAGCTATGGCTCTAGCATAGGATCTTGGTTTAGGAAACAGTATCCTAAGCAGAACAAGACCTTTCATGTGTATGCAATTGAAGCTGATAAGACCTTTCATAAGGAGTATGGGTTGAAGAAGGGGATCACTTTGGTTCCTTATGCTGCCTGGGTGAAGAATGAAACNTTGACGTTTGAGATTCATCGCGATCCTGGGGAGCATGTTGAGGTTAAAGGAAGGGGGATGGGTAGGATTCAACCTTTGAGGTCTTCAGGGAAGGAGGAGTTTGATGGGGAAGTGGAGAAGATAAGGGGATTCGATTTTGCTGACTGGTTGAAGAGCACGGTTTCGAAGAATGATTTTGTTGTGATGAAAATGGATGTGGAGGGTACTGAATTTGAACTGATTCCGAGATTGTTTAAAACTGGGGCTATTTGTTTGGTGGATGAGGTTTTCCTTGAATGCCATTACAATAGGTGGCAGAGATGTTGTCCTGGGCAGAGGAGTTCAAAGTATGAGAAAACATATGACCAATGCTTGGAGCTCTTCAATTCTCTTAGACAAAGTGGAGTTCTTGTTCATCAATGGTGGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold00190	243685	245226	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0008152 metabolic process

molecular_function
GO:0008168 methyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur000190s00015741.1	PF08241.7	Methyltransf_11	149	199	8.30E-06
Glyur000190s00015741.1	PF05050.7	Methyltransf_21	319	475	3.30E-07

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	10.711
SRR1783600	control	10.873
SRR1783602	moderate drought stress	10.395
SRR1811619	moderate drought stress	10.456

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	11.031
DRR006520	Root Summer glycyrrhizin high producing strain	11.242
DRR006521	Root Winter glycyrrhizin high producing strain	1.270
DRR006522	Root Winter glycyrrhizin high producing strain	1.048
DRR006523	Root Summer glycyrrhizin low producing strain	21.255
DRR006524	Root Summer glycyrrhizin low producing strain	20.560
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.712
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.703

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	39.925
SRR2868004	Drought Stress (root)	36.187
SRR2967015	Control (root)	34.744

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	19.106
SRR9715740	Leaf	15.378
SRR9715741	Leaf	18.644
SRR9715739	Root	21.166
SRR9715742	Root	24.197
SRR9715743	Root	20.828

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	24.358
SRR8749028	MeJA induced 9h	11.902
SRR8749029	MeJA induced 9h	12.954
SRR8749030	Uninduced	9.991
SRR8749031	Uninduced	2.153
SRR8749032	Uninduced	2.026

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	17.480
SRR8400027	Control - Root	28.630