Gene detail information of Glyur000190s00015720 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01750.2 | 1.00E-77 | Protein of unknown function (DUF567) |
| NR | XP_003552292.1 | 3.17E-135 | PREDICTED: protein LURP-one-related 15-like [Glycine max] |
| Swissprot | tr|Q9LZX1|LOR15_ARATH | 3.00E-100 | Protein LURP-one-related 15 |
| trEMBL | tr|I1N351|I1N351_SOYBN | 1.00E-135 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G44120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00190 | 61502 | 63525 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000190s00015720.1 | PF04525.7 | Tub_2 | 24 | 204 | 2.60E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 47.424 |
| SRR1783600 | control | 47.165 |
| SRR1783602 | moderate drought stress | 45.220 |
| SRR1811619 | moderate drought stress | 44.887 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 129.907 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 128.053 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 90.657 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 88.774 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 322.107 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 323.358 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 51.209 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 50.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 52.632 |
| SRR2868004 | Drought Stress (root) | 85.288 |
| SRR2967015 | Control (root) | 104.612 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 348.298 |
| SRR9715740 | Leaf | 277.761 |
| SRR9715741 | Leaf | 427.637 |
| SRR9715739 | Root | 231.421 |
| SRR9715742 | Root | 384.633 |
| SRR9715743 | Root | 320.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 70.416 |
| SRR8749028 | MeJA induced 9h | 66.848 |
| SRR8749029 | MeJA induced 9h | 62.634 |
| SRR8749030 | Uninduced | 57.043 |
| SRR8749031 | Uninduced | 38.467 |
| SRR8749032 | Uninduced | 70.468 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 73.206 |
| SRR8400027 | Control - Root | 108.223 |