Gene detail information of Glyur000189s00009621 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26040.1 | 7.00E-48 | HXXXD-type acyl-transferase family protein |
| NR | XP_003532711.2 | 2.51E-125 | PREDICTED: vinorine synthase-like [Glycine max] |
| Swissprot | tr|Q70PR7|VINSY_RAUSE | 2.00E-41 | Vinorine synthase |
| trEMBL | tr|I1KRY4|I1KRY4_SOYBN | 9.00E-126 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G10660.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00189 | 211857 | 219439 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000189s00009621.1 | PF02458.10 | Transferase | 57 | 372 | 1.50E-54 |
| Glyur000189s00009621.2 | PF02458.10 | Transferase | 57 | 372 | 1.50E-54 |
| Glyur000189s00009621.3 | PF01603.15 | B56 | 72 | 484 | 5.80E-174 |
| Glyur000189s00009621.4 | PF01603.15 | B56 | 72 | 484 | 5.80E-174 |
| Glyur000189s00009621.5 | PF01603.15 | B56 | 72 | 484 | 5.80E-174 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.908 |
| SRR1783600 | control | 4.924 |
| SRR1783602 | moderate drought stress | 5.308 |
| SRR1811619 | moderate drought stress | 5.358 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.731 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.723 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 30.871 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 31.335 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.410 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.601 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.666 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.590 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 24.995 |
| SRR2868004 | Drought Stress (root) | 23.851 |
| SRR2967015 | Control (root) | 10.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.221 |
| SRR9715740 | Leaf | 2.708 |
| SRR9715741 | Leaf | 1.337 |
| SRR9715739 | Root | 0.549 |
| SRR9715742 | Root | 2.502 |
| SRR9715743 | Root | 1.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.169 |
| SRR8749028 | MeJA induced 9h | 2.408 |
| SRR8749029 | MeJA induced 9h | 2.120 |
| SRR8749030 | Uninduced | 2.000 |
| SRR8749031 | Uninduced | 1.329 |
| SRR8749032 | Uninduced | 1.289 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.281 |
| SRR8400027 | Control - Root | 5.881 |