Gene detail information of Glyur000189s00009611 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21480.1 | 2.00E-92 | BRCT domain-containing DNA repair protein |
| NR | XP_004486073.1 | 0 | PREDICTED: uncharacterized protein LOC101501524 [Cicer arietinum] |
| trEMBL | tr|G7ISL3|G7ISL3_MEDTR | 0 | BRCT domain DNA repair protein {ECO:0000313|EMBL:AES64270.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00189 | 148723 | 154160 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.526 |
| SRR1783600 | control | 10.473 |
| SRR1783602 | moderate drought stress | 10.618 |
| SRR1811619 | moderate drought stress | 10.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.575 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.398 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.759 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.506 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.357 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.600 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.202 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.006 |
| SRR2868004 | Drought Stress (root) | 9.719 |
| SRR2967015 | Control (root) | 10.889 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.718 |
| SRR9715740 | Leaf | 2.772 |
| SRR9715741 | Leaf | 2.769 |
| SRR9715739 | Root | 0.596 |
| SRR9715742 | Root | 3.042 |
| SRR9715743 | Root | 2.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.633 |
| SRR8749028 | MeJA induced 9h | 22.378 |
| SRR8749029 | MeJA induced 9h | 10.150 |
| SRR8749030 | Uninduced | 1.480 |
| SRR8749031 | Uninduced | 1.726 |
| SRR8749032 | Uninduced | 1.844 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 11.338 |
| SRR8400027 | Control - Root | 10.123 |