Gene detail information of Glyur000189s00009600 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_006594475.1 | 5.29E-20 | PREDICTED: cytokinesis protein sepA-like isoform X1 [Glycine max] |
| trEMBL | tr|K7M121|K7M121_SOYBN | 6.00E-21 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G28640.2} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00189 | 82962 | 84253 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.121 |
| SRR1783600 | control | 0.120 |
| SRR1783602 | moderate drought stress | 0.252 |
| SRR1811619 | moderate drought stress | 0.248 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.119 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.118 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.369 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.363 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.243 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.150 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.679 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.156 |
| SRR2868004 | Drought Stress (root) | 0.183 |
| SRR2967015 | Control (root) | 0.148 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 57.374 |
| SRR9715740 | Leaf | 2.435 |
| SRR9715741 | Leaf | 11.633 |
| SRR9715739 | Root | 0.518 |
| SRR9715742 | Root | 0.252 |
| SRR9715743 | Root | 0.136 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.549 |
| SRR8749028 | MeJA induced 9h | 1.331 |
| SRR8749029 | MeJA induced 9h | 1.309 |
| SRR8749030 | Uninduced | 0.861 |
| SRR8749031 | Uninduced | 0.296 |
| SRR8749032 | Uninduced | 1.204 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.305 |
| SRR8400027 | Control - Root | 0.248 |