Gene detail information of Glyur000189s00009587 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G21460.1 | 2.00E-42 | Glutaredoxin family protein |
| NR | XP_004486046.1 | 8.87E-66 | PREDICTED: monothiol glutaredoxin-S10-like [Cicer arietinum] |
| COG | YP_007054574.1 | 2.00E-08 | monothiol glutaredoxin [Rivularia sp. PCC 7116] |
| Swissprot | tr|Q9LIF1|GRS10_ARATH | 6.00E-54 | Monothiol glutaredoxin-S10 |
| trEMBL | tr|I1M1D2|I1M1D2_SOYBN | 7.00E-66 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA13G28740.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00189 | 16714 | 17022 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000189s00009587.1 | PF00462.19 | Glutaredoxin | 13 | 75 | 5.20E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.337 |
| SRR1783600 | control | 2.122 |
| SRR1783602 | moderate drought stress | 1.627 |
| SRR1811619 | moderate drought stress | 1.533 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.415 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.554 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.201 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.352 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.030 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.340 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 12.296 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.016 |
| SRR2868004 | Drought Stress (root) | 8.636 |
| SRR2967015 | Control (root) | 5.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.329 |
| SRR9715740 | Leaf | 29.361 |
| SRR9715741 | Leaf | 9.974 |
| SRR9715739 | Root | 8.496 |
| SRR9715742 | Root | 13.691 |
| SRR9715743 | Root | 14.335 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.109 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.057 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.892 |
| SRR8400027 | Control - Root | 0.985 |