Gene detail information of Glyur000188s00019481 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02440.1 | 2.00E-09 | |
| NR | XP_003552157.1 | 1.44E-86 | PREDICTED: uncharacterized protein At3g17950-like isoform X1 [Glycine max] |
| Swissprot | tr|Q6DR24|Y3795_ARATH | 2.00E-06 | Uncharacterized protein At3g17950 |
| trEMBL | tr|I1N2E3|I1N2E3_SOYBN | 5.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G38620.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00188 | 52863 | 55070 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.349 |
| SRR1783600 | control | 0.420 |
| SRR1783602 | moderate drought stress | 0.288 |
| SRR1811619 | moderate drought stress | 0.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.807 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.765 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.330 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.322 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.641 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.657 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.518 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.552 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.255 |
| SRR2868004 | Drought Stress (root) | 3.805 |
| SRR2967015 | Control (root) | 4.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.291 |
| SRR9715740 | Leaf | 0.426 |
| SRR9715741 | Leaf | 0.254 |
| SRR9715739 | Root | 1.596 |
| SRR9715742 | Root | 1.082 |
| SRR9715743 | Root | 0.994 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.514 |
| SRR8749028 | MeJA induced 9h | 0.099 |
| SRR8749029 | MeJA induced 9h | 0.543 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.563 |
| SRR8400027 | Control - Root | 4.167 |