Gene detail information of Glyur000188s00019480 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G01650.1 | 9.00E-37 | Tautomerase/MIF superfamily protein |
| NR | KEH22850.1 | 1.52E-64 | macrophage migration inhibition factor-like protein [Medicago truncatula] |
| COG | YP_007127372.1 | 5.00E-18 | macrophage migration inhibitory factor family protein [Gloeocapsa sp. PCC 7428] |
| trEMBL | tr|A0A072UAN8|A0A072UAN8_MEDTR | 6.00E-65 | Macrophage migration inhibition factor-like protein {ECO:0000313|EMBL:KEH22850.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00188 | 47394 | 49413 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000188s00019480.1 | PF01187.13 | MIF | 2 | 118 | 1.10E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.795 |
| SRR1783600 | control | 0.604 |
| SRR1783602 | moderate drought stress | 8.451 |
| SRR1811619 | moderate drought stress | 8.450 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.807 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.195 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.924 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.388 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.274 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.892 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 70.687 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 76.695 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.271 |
| SRR2868004 | Drought Stress (root) | 4.735 |
| SRR2967015 | Control (root) | 4.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 102.116 |
| SRR9715740 | Leaf | 39.783 |
| SRR9715741 | Leaf | 72.704 |
| SRR9715739 | Root | 1.685 |
| SRR9715742 | Root | 8.569 |
| SRR9715743 | Root | 3.992 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.432 |
| SRR8749028 | MeJA induced 9h | 0.113 |
| SRR8749029 | MeJA induced 9h | 0.066 |
| SRR8749030 | Uninduced | 0.129 |
| SRR8749031 | Uninduced | 0.064 |
| SRR8749032 | Uninduced | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.610 |
| SRR8400027 | Control - Root | 18.099 |