Gene detail information of Glyur000188s00019473 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02420.1 | 4.00E-05 | |
| NR | XP_006586274.1 | 4.25E-37 | PREDICTED: uncharacterized protein LOC102665011 [Glycine max] |
| Swissprot | tr|Q9LZ60|SMR3_ARATH | 4.00E-08 | Cyclin-dependent protein kinase inhibitor SMR3 |
| trEMBL | tr|I1KZE4|I1KZE4_SOYBN | 2.00E-30 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G47360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00188 | 15950 | 17542 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.607 |
| SRR1783600 | control | 0.441 |
| SRR1783602 | moderate drought stress | 1.253 |
| SRR1811619 | moderate drought stress | 1.132 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.531 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.842 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.640 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.781 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.941 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.675 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.660 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.060 |
| SRR2868004 | Drought Stress (root) | 1.134 |
| SRR2967015 | Control (root) | 2.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.908 |
| SRR9715740 | Leaf | 2.936 |
| SRR9715741 | Leaf | 0.945 |
| SRR9715739 | Root | 0.025 |
| SRR9715742 | Root | 2.310 |
| SRR9715743 | Root | 1.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.102 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.050 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.381 |
| SRR8400027 | Control - Root | 1.557 |