Gene detail information of Glyur000185s00016475 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G47485.1 | 1.00E-11 | |
| NR | AFK45841.1 | 1.45E-50 | unknown [Lotus japonicus] |
| trEMBL | tr|I3SZZ9|I3SZZ9_LOTJA | 5.00E-51 | Uncharacterized protein {ECO:0000313|EMBL:AFK45841.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00185 | 226842 | 227282 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.171 |
| SRR1783600 | control | 1.143 |
| SRR1783602 | moderate drought stress | 0.193 |
| SRR1811619 | moderate drought stress | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.033 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 28.470 |
| SRR2868004 | Drought Stress (root) | 82.543 |
| SRR2967015 | Control (root) | 62.483 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.428 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.612 |
| SRR9715739 | Root | 1.519 |
| SRR9715742 | Root | 0.697 |
| SRR9715743 | Root | 0.768 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 32.418 |
| SRR8749028 | MeJA induced 9h | 19.873 |
| SRR8749029 | MeJA induced 9h | 26.673 |
| SRR8749030 | Uninduced | 14.004 |
| SRR8749031 | Uninduced | 26.520 |
| SRR8749032 | Uninduced | 27.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 20.066 |
| SRR8400027 | Control - Root | 13.758 |