Gene detail information of Glyur000185s00016469 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G16210.1 | 0 | HEAT repeat-containing protein |
| NR | XP_003518631.1 | 0 | PREDICTED: lisH domain and HEAT repeat-containing protein KIAA1468-like isoform X1 [Glycine max] |
| trEMBL | tr|K7K780|K7K780_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G09790.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00185 | 197133 | 206396 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.258 |
| SRR1783600 | control | 17.185 |
| SRR1783602 | moderate drought stress | 13.988 |
| SRR1811619 | moderate drought stress | 13.848 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 10.848 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.506 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 9.726 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.655 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.372 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.171 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.174 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.082 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 35.595 |
| SRR2868004 | Drought Stress (root) | 36.147 |
| SRR2967015 | Control (root) | 29.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 20.083 |
| SRR9715740 | Leaf | 18.347 |
| SRR9715741 | Leaf | 29.377 |
| SRR9715739 | Root | 3.352 |
| SRR9715742 | Root | 12.746 |
| SRR9715743 | Root | 12.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 20.761 |
| SRR8749028 | MeJA induced 9h | 30.028 |
| SRR8749029 | MeJA induced 9h | 13.123 |
| SRR8749030 | Uninduced | 9.845 |
| SRR8749031 | Uninduced | 7.258 |
| SRR8749032 | Uninduced | 5.460 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 29.443 |
| SRR8400027 | Control - Root | 31.657 |