Gene detail information of Glyur000185s00016468 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G18280.1 | 3.00E-16 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003624386.1 | 3.14E-24 | Non-specific lipid-transfer protein [Medicago truncatula] |
| Swissprot | tr|P86809|NLTP2_APIGA | 4.00E-22 | Non-specific lipid-transfer protein 2 {ECO:0000303|PubMed:23913675} |
| trEMBL | tr|G7KV73|G7KV73_MEDTR | 1.00E-24 | Uncharacterized protein {ECO:0000313|EMBL:AFK45216.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00185 | 193210 | 193440 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000185s00016468.1 | PF14368.1 | LTP_2 | 12 | 61 | 1.90E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.644 |
| SRR1783600 | control | 2.877 |
| SRR1783602 | moderate drought stress | 4.932 |
| SRR1811619 | moderate drought stress | 5.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 321.383 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 297.932 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.675 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.436 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 13.577 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.868 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1016.271 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 899.517 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.107 |
| SRR2868004 | Drought Stress (root) | 18.618 |
| SRR2967015 | Control (root) | 4.513 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 28.403 |
| SRR9715740 | Leaf | 71.528 |
| SRR9715741 | Leaf | 79.786 |
| SRR9715739 | Root | 11.027 |
| SRR9715742 | Root | 48.668 |
| SRR9715743 | Root | 40.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.555 |
| SRR8400027 | Control - Root | 8.300 |