Gene detail information of Glyur000185s00016467 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G48750.1 | 8.00E-25 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
| NR | XP_003555069.1 | 6.37E-38 | PREDICTED: probable non-specific lipid-transfer protein AKCS9-like [Glycine max] |
| Swissprot | tr|P82353|NLTP2_PRUAR | 4.00E-30 | Non-specific lipid-transfer protein 2 |
| trEMBL | tr|I1N5L5|I1N5L5_SOYBN | 2.00E-38 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G00710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00185 | 187257 | 187547 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000185s00016467.1 | PF14368.1 | LTP_2 | 11 | 95 | 2.90E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 48.271 |
| SRR1783600 | control | 48.241 |
| SRR1783602 | moderate drought stress | 22.634 |
| SRR1811619 | moderate drought stress | 22.743 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 188.824 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 178.556 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 28.896 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 30.806 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 182.289 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 191.147 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1015.106 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1035.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 84.644 |
| SRR2868004 | Drought Stress (root) | 118.456 |
| SRR2967015 | Control (root) | 129.945 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 231.774 |
| SRR9715740 | Leaf | 328.315 |
| SRR9715741 | Leaf | 490.835 |
| SRR9715739 | Root | 15.038 |
| SRR9715742 | Root | 58.842 |
| SRR9715743 | Root | 48.515 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.244 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.598 |
| SRR8400027 | Control - Root | 43.627 |