Gene detail information of Glyur000185s00016466 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G38200.1 | 7.00E-161 | Class I glutamine amidotransferase-like superfamily protein |
| NR | XP_003518630.1 | 0 | PREDICTED: uncharacterized protein LOC100817990 [Glycine max] |
| COG | YP_001691518.1 | 1.00E-22 | putative glutamine amidotransferase [Finegoldia magna ATCC 29328] |
| trEMBL | tr|I1JDL2|I1JDL2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G09770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold00185 | 173321 | 176965 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur000185s00016466.1 | PF07722.8 | Peptidase_C26 | 29 | 242 | 3.10E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.127 |
| SRR1783600 | control | 0.103 |
| SRR1783602 | moderate drought stress | 0.124 |
| SRR1811619 | moderate drought stress | 0.178 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.967 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.979 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 29.680 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 27.741 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.736 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.685 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.245 |
| SRR2868004 | Drought Stress (root) | 15.870 |
| SRR2967015 | Control (root) | 10.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.182 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.045 |
| SRR9715742 | Root | 0.849 |
| SRR9715743 | Root | 0.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 13.721 |
| SRR8749028 | MeJA induced 9h | 283.920 |
| SRR8749029 | MeJA induced 9h | 77.963 |
| SRR8749030 | Uninduced | 456.361 |
| SRR8749031 | Uninduced | 770.030 |
| SRR8749032 | Uninduced | 464.688 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.632 |
| SRR8400027 | Control - Root | 0.356 |